FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATTCAACCTCTTAAGTGCTTTTTGCATTCTATTCACTTTCTCTAATCCC13.571428571428571No Hit
AGCTCTATGTTGACAAAATGACCATCGTCAACATCCACAGCACTCTGCTG13.571428571428571No Hit
TCCTATCTCCAGTGATGGTCTGAAAGATGACCTTCTTGAAAATTTGCAGG13.571428571428571No Hit
GAAGACGACAAACTGAGGACCAAATGGAAGAAATAATGATTAATATCTAG13.571428571428571No Hit
CGACCCGTGTTACCATTCCATTCAAGTCCTCCGATGAGGACCCCAACTGC13.571428571428571No Hit
ATCCACAATATCAGGTGCAAGATCCCAATGATATTTGCTGCAATGACGAG13.571428571428571No Hit
GTCCTATTATATAAGAGCCCCATGAACATGGCAAGGGCTCCATTTGAATA13.571428571428571No Hit
CTATTGTTCCAACTCCTTTCACCGCAGCACCTGCGGCACCAGACCTTCTG13.571428571428571No Hit
ACACTGAGCTCAATTGCTCTCTTAGCTCCTCATAGTCGATGGAATGTCCC13.571428571428571No Hit
AGAATACTGACATCAGAGTCACAGCTGGCAATAACAAAAGAGAAGAAAGA13.571428571428571No Hit
CTTTCAAAGAAAAAGGAGAGTAAGAGACAACATGACCAAGAAGCTGTCTC13.571428571428571No Hit
CGTAAGGACACTGTTCCAGCAAATGAGGGATGTGCTTGGGACATTTGACT13.571428571428571No Hit
CTGCTGTTCCTGTTGATATTCTTCCCTCATGGACTCAGGCACTCCTTCCG13.571428571428571No Hit
CAGTTGTGCATGTTTTTCTCAAACTAGGATGCCTAAAATGGATTAATCTT13.571428571428571No Hit
AGTTTCTGCATTCCAAGGGGGAGCAAGATATGAATGGTTCACTTTTGACA13.571428571428571No Hit
AAGCAGGAGTGGACAGATTCTACAGGACCTGCAAGTTAGTGGGAATCAAC13.571428571428571No Hit
CCATTCAAGTCCTCCGATGAGGACCCCAACTGCATTTTTGACATCCTCAT13.571428571428571No Hit
TTCCCATTTAGGGAATTTTGGACAAAGCGTCTACGCTGCCGTCCTCGCTC13.571428571428571No Hit
GTAGTAGGATTAGAGAAAGTGAATAGAATGCAAAAAGCACTTAAGAGGTT13.571428571428571No Hit
TAATAAGATAGTGGTAGTAGGATTAGAGAAAGTGAATAGAATGCAAAAAG13.571428571428571No Hit
GTGCTGGGAAGGACCCTAAGAAAACAGGAGGACCCATATATAGAAGAGTA13.571428571428571No Hit
TATGGTGCCTTAGTACTTTTGAATTGGTTTTTGTGAATGCTTTATCTAGA13.571428571428571No Hit
CCCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTATATTTTCAGAGA13.571428571428571No Hit
ATATATGGGTCCTCCTGTTTTCTTAGGGTCCTTCCCAGCACTGGGATGCT13.571428571428571No Hit
ATCATGACTCGAACAAAGGTGTAACGGCATCATGTCCTCATGCTGGAGCA13.571428571428571No Hit
CCTCAGTGAAAGCCCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATT13.571428571428571No Hit
GAATAGACTATCTTTCCCTTATCTATTCTGAAGATATTGTATGAGTCCTG13.571428571428571No Hit
CTTCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTTTTCG13.571428571428571No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)