FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_E5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_E5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATGTGCACTGAACTCAAACTCAGTGATTATGAGGGACGACTAATCCAGA110.0No Hit
CAGCCATCTGTTCCATAGCCTTTGCCGTAGTGCTAGCCAGCACCATTCTG110.0No Hit
GTGCACCAGTTGAATAGCTTAGTGACACCTCCTTGGCCCCATGGAACGTT110.0No Hit
ACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCTTGAGGCTCTCATGG110.0No Hit
GAGTAAGACCTGCTGTTGCATATTCGTCATTGTTTGCTTGGCGCCAAACT110.0No Hit
GGTAGCTCCATGCTAAAATTAGCCACAAATCCATAGCGATAAAAAAAGCT110.0No Hit
CAGCCACTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAA110.0No Hit
GGTTCCATTGGAATGTTTGTCATTTAGCAAGGCCCCTTGAGTCAAGAAGA110.0No Hit
ATACCAGATCCAGCATTTCTTTCCATTGCGAATGCATATCTCGGTACCAC110.0No Hit
TCTACTCCCATTTTGCTGACTCTTATCCCTCTCAGCGACATCTCCGTGCT110.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)