FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_E2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_E2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACAAGTGGCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTTCCC14.0No Hit
TTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCT14.0No Hit
TGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGAC14.0No Hit
ATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCT14.0No Hit
AATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA14.0No Hit
CTCCTGCAGTGTACATCATCTACCATCAAGTCACTTCTGTTAATTGAAAC14.0No Hit
GGGCGAAGGAGGTGTCACTAAGCTATTCAACTGGTGCACTTGCCAGTTGC14.0No Hit
TCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGCC14.0No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA14.0No Hit
GTATTTATCGTCGCTTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAA14.0No Hit
GAACTCAAACTCAGTGATTATGATGGACGACTAATCCAGAATAGCATAAC14.0No Hit
ACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACC14.0No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG14.0No Hit
ATCCACAAATCAGTCATGAAAACACAAAGCTCCAAACAAGCACAACGCCA14.0No Hit
TGTTGTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGT14.0No Hit
CAGTATATGTAACACAACAGGGGTAGAGAAGCCTAAATTTCTTCCTGATT14.0No Hit
GCCCCCCAAGATCGAAGGTTCCAGGTTCCAGGTTGTCCCTAAGTGCCTGA14.0No Hit
ATATATGCGTCTCCACAACTTGAGGGGTTTTCGGCTGAATCTAGAAAATT14.0No Hit
GCCGTTACACCTTTGTTCGAGTCATGATTGGGCCATGAACTTGTCTTGGG14.0No Hit
CTTTCCAGTCTCTGCGCGATCTCGGCTTTGAGGGGGCCTGACGGGATGAT14.0No Hit
TCCAAGCTCCAGTGCTGGTCTGAAAGATGACATTCTAGAAAATTTGCAGG14.0No Hit
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTCAATCC14.0No Hit
CATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGT14.0No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG14.0No Hit
CATTTATTCCTACGATATCTTGCTTTATTGAGAAGTTATTGTCTGTCCCA14.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)