FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A9a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A9a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGATAATTATTGTCATTCATTACGACTTATTTTAATATATTTCCAATTT17.6923076923076925No Hit
ATGGGGACCCGAACAACATGGATAGAGCAGTTAAACTATACAAGAAGCTC17.6923076923076925No Hit
GTGATCCAATTCCAGTCACGTCCTCAGCAGAGGACCCCCACTACATGTTT17.6923076923076925No Hit
ACTCCCTGCTCACTGTGGAGTCTCCTTCTCCCTTTCCCTCTGGTCCTCAC17.6923076923076925No Hit
TATACCTATCCATAAAACTCAAGATATGAGTCAGTAGATTGTTCAGCAAT17.6923076923076925No Hit
CTCCAGCCACGTCACTGCACTCCTAGCCATGCCTGCAACCTCCCTCACTT17.6923076923076925No Hit
CTAAATTAATGATAAAGGGAAAGAAGTCCTAGTGCTATGGGGCATTCCCC17.6923076923076925No Hit
ACAGTGTTCTGAGTGAGTATCTCGCGAGTGAGCGACTGCCACATTAGATC17.6923076923076925No Hit
ATTATATTTTGCATAGGCCTGATAATGAAACAGTCTCGTGACATTTCATA17.6923076923076925No Hit
ACTCCCGGCTCACTGTGGAGTCTCCTTCTCCCGTTCCCTCGGTTCCTCTC17.6923076923076925No Hit
TCCTAAAATTACCTTAGTCAGAGGTGACAAGATTGGTCTTGTCTTTAGAC17.6923076923076925No Hit
GTTAACCTTCTAGAAGACAAGCATAACGGGAAACTATGCAAACTAAGAGG17.6923076923076925No Hit
GTCTTATACAATCCAGAAAGGTTAGTTCTGGATGCTGAACAAAACGACAG17.6923076923076925No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)