FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGATAATTATTGTCATTCATTACGACTTATTTTAATATATTTCCAATTT12.380952380952381No Hit
ATAATTTTGTATATGATTAAAATTAAACATGAAAGTGCACAAGGTTAATA12.380952380952381No Hit
GTTCAAGGGTATTGGAGTCCAAGCTTTCCACATAAACATATGAATCAATA12.380952380952381No Hit
ATGGGGACCCGAACAACATGGATAGAGCAGTTAAACTATACAAGAAGCTC12.380952380952381No Hit
CCTGTACATCCTCAACAAAAGACTCGCGCTGCGATGCCGTCCACACCATC12.380952380952381No Hit
TTACATTTTATAACAAGCGATATTAAATATTTGAAGATTATTTATGCTCC12.380952380952381No Hit
TACAAGAACTGTGATGATATTCTAGGTATTTATATCTTATATCATCAAAA12.380952380952381No Hit
AGTGTGCAGGCGGCAGAGGATCTGGCGGGACACACCTGAGGAAGACTCGG12.380952380952381No Hit
TATACCTATCCATAAAACTCAAGATATGAGTCAGTAGATTGTTCAGCAAT12.380952380952381No Hit
CTCCAGCCACGTCACTGCACTCCTAGCCATGCCTGCAACCTCCCTCACTT12.380952380952381No Hit
GGTAGAACTGAAAATTTTCAAGAATGTCATCTTTCAGAACATAAATTGAT12.380952380952381No Hit
ACAGTGTTCTGAGTGAGTATCTCGCGAGTGAGCGACTGCCACATTAGATC12.380952380952381No Hit
TGTCATGATGGCATCAATTGGCTAACAATTGGAATTTCTGGCCCAGACAA12.380952380952381No Hit
TCAATCAGCTGGGTGCCGTCCTCGCGGCCGACGTACCCCGCTGAAATCAG12.380952380952381No Hit
GCCCATCGCCATGACTGCCAGCTGTGCATCCAAGGGGTCATCGCCGTAAA12.380952380952381No Hit
GTTCTTTATCACTGTTACTCAAATACTCATCTCAGCTGATTCATTTACTC12.380952380952381No Hit
GTCTGTGAGACCGATGCTGTGAATCAGCAAGCTGTTCAGACTGTCTCTTT12.380952380952381No Hit
CACAGAGGGCACAAGCAGGCAGAGGGAGATCGAGAAGAAGCAGGCTCCCC12.380952380952381No Hit
GTCTTATACAATCCAGAAAGGTTAGTTCTGGATGCTGAACAAAACGACAG12.380952380952381No Hit
GGATTATCTGAGCCTATCAATGATCACTTTTCCGAGCTGTCTCTAAAACA12.380952380952381No Hit
AGTGGGAGGTAGCCCGTCATAGCGCGCGCTTTAAGGAGCGCCTGAAATTC12.380952380952381No Hit
GTCCCGCCAGATACGCTGCATCCTGCACCTGTCTCTTATACACATCTGAC12.380952380952381No Hit
TATGCAGCCGACCTGAAGAGCACACAGAATGCCATTGACGAGATTACTAA12.380952380952381No Hit
CCTCAATCCTGTGGCCAGTCTCAATTTTGTGCTTTTTACATATTTTGGAC12.380952380952381No Hit
GACAAGTAGTTTTAAATAATCTATTCAAATGTTGCAATTTACAGTTGCAT12.380952380952381No Hit
ACAATAATTATAAAGGAAAAGAAGTCCTCGTGCAATCGGGCAATCACCAT12.380952380952381No Hit
TAGGTAGATTCGGAACTTGGCGTCTTGTGGGTCTAGACCCCTGTGGTGGT12.380952380952381No Hit
GTGATCCAATTCCAGTCACGTCCTCAGCAGAGGACCCCCACTACATGTTT12.380952380952381No Hit
ACTCCCTGCTCACTGTGGAGTCTCCTTCTCCCTTTCCCTCTGGTCCTCAC12.380952380952381No Hit
TATCAGAGAACAAGAGCGCTTGTTCGCACCGGAATGGATCCCAGAATGTG12.380952380952381No Hit
ACAGTAAGTTCTGTCTATAATCATCTCAGGAACACTCAAAGCCTAGATCG12.380952380952381No Hit
CTAACACAACATCGGGCTAAACTGCACCAAATATTCCAGGCATACTGTCA12.380952380952381No Hit
CTAAATTAATGATAAAGGGAAAGAAGTCCTAGTGCTATGGGGCATTCCCC12.380952380952381No Hit
ATTATATTTTGCATAGGCCTGATAATGAAACAGTCTCGTGACATTTCATA12.380952380952381No Hit
ACTCCCGGCTCACTGTGGAGTCTCCTTCTCCCGTTCCCTCGGTTCCTCTC12.380952380952381No Hit
GAGCCATGCCAGTTATCCCTGCACACACATGTGATTTCACTAGAATCAGG12.380952380952381No Hit
ATTTACGGCGATGACCCCTTGGATGCACAGCTGGCAGTCATGGCGATGGG12.380952380952381No Hit
AACTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTTTCACTGAGGA12.380952380952381No Hit
TCCTAAAATTACCTTAGTCAGAGGTGACAAGATTGGTCTTGTCTTTAGAC12.380952380952381No Hit
CCTTAAAGCGCGCGCTATGACGGGCTACCTCCCACTAGGCCATGACCTGT12.380952380952381No Hit
GTTAACCTTCTAGAAGACAAGCATAACGGGAAACTATGCAAACTAAGAGG12.380952380952381No Hit
GAAATGAAAAGTGGCGAGAGCAATTGGGACAGAAATTTGAGGAAATAAGG12.380952380952381No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)