FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGATAAATACATTTGAAAAAAAGACGATCAGTAATCCACAATATCAGGT13.8461538461538463No Hit
CATTACTACAGAACTAATAAAATCAATATTTCTATGAATGGGGCTAGTGG13.8461538461538463No Hit
GCACAAGAATCGAGGAGTATCACCCAGAGGTAGAAGAAGAAACCCAGCTG13.8461538461538463No Hit
CTCCAAGTGATCCAATATGATTCTGATGCAGTACGTTCTCATTTTCTTTA13.8461538461538463No Hit
GTGTTATTTTTATCATTAAATAAGCTGAAAAGACAAATCTCTTATCTAAT13.8461538461538463No Hit
AGTCACAGTTGGATAATAATAACTAGGATGCAGTCAGCTACACTCAATTC13.8461538461538463No Hit
GATATATATTTACAATGAACTAATTATAAAGTAATATACAATGAAAGTTA13.8461538461538463No Hit
CTGTAGTAATGTAGATTACTATTAAGTAAAGGTAGTTTACTTGTCAGATG13.8461538461538463No Hit
TTCTAGTAATGTGTCTAAAGTTTATGTTTAATTGTTCGAATGATAAAATA13.8461538461538463No Hit
ACTAACAAAAATCCACGAATCAGGCATGAAAAAAGAATGGTGCGGTCTAT13.8461538461538463No Hit
GGCTCATGCCACAAACAATCATCGGCTCCGCCTCGAACAAAAGTAATTAA13.8461538461538463No Hit
CGGTGAGCGTGAACACAAATCCTAAAATTCACTTAGTCAGAGGTGACAAG13.8461538461538463No Hit
TTTCTCCTCTGACTAAGGTAATTTTAGGATTTGTGTTAACTCTCACCCTG13.8461538461538463No Hit
ACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACC13.8461538461538463No Hit
GTACCTATTTCTTAGACATATTTGAGGACTAAATAAGTGTATGTGGCATA13.8461538461538463No Hit
GTAAATAATACAATAATATCACAAGTAACATAACATTAAACGATAACTGA13.8461538461538463No Hit
GAATAAGACTACGGGGAGCAGCAGGATTTTCACCTATAACATTACGCGTA13.8461538461538463No Hit
GGACAGAATGGATAGCAAAAAGTAGCATTGCCACAACTACTTCAGTGCAT13.8461538461538463No Hit
CTTCAATCCCACCAATAGCAGATGGAAATAATCCTCATAGACGTTGCATT13.8461538461538463No Hit
CCATTATTGTGCTCCCATGTCCCCTGCTGCTGTGCTTGCTCGCGCTCTTG13.8461538461538463No Hit
CCACCAGAGAGACTACCAATACAAAAAAAATCGACACAGTTGAATACATC13.8461538461538463No Hit
CCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTTCT13.8461538461538463No Hit
GGACCATCATAAAGCATCAATAAAATGAGCAATCTTGAAAAAGTAGAGAA13.8461538461538463No Hit
ATATATATAACTATCCAAACTCACATAATACTGGGACACCTGGGTGACTC13.8461538461538463No Hit
GCATAAAAATGAATATAACTGAAGCAAACCTGAGTTAGAAGAATGGAACA13.8461538461538463No Hit
GTGCTCCCATGTCCCCTGCTGCTGTGCTTGCTCGCGCTCTTGCTCTCCTG13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)