FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTCTTTTTTTCTCAATATAATGTTAATACAACTCATGATAGTGTCTGT14.761904761904762No Hit
GATATTCCAGATTCTGGTTGAAAGACACCCACGGTCGATTCGAGCCATGC14.761904761904762No Hit
CAACACAAAACAATGCACATAGTCTGTTAACGTCAGCTTTTTATTTTTTT14.761904761904762No Hit
ATATTATCATTATTATATTTAAATACAATTTGTGTTAATTTATAAATTGC14.761904761904762No Hit
GTTCATTAGCCATTGCATTATATCCAAAAATCACAATACATATATATCAA14.761904761904762No Hit
ATTTACTGAAGGTCCAGTTTGTGCCAAGCACAGTGCTTGGTACTTGACGT14.761904761904762No Hit
GTCAATAACATCGTCAGAATTTTCAATACTTCCATACATCACTATTATAA14.761904761904762No Hit
GTGTTAAAGTACAACGGCATAATAACAGACACTATCAAGACTTGGAGAAA14.761904761904762No Hit
CTATTCAACTGTCGCCAGTTCATTGGTACTGGTAGTCTCCCTGGGGGCAA14.761904761904762No Hit
CCACTGTCGACCATATCGACATAATAAAAAAGTACAAATCACAAAGGAAA14.761904761904762No Hit
GTGAATATATTTTAGTTTAAATAGATACATTTAATTTATTTAATTACGGT14.761904761904762No Hit
AGACCAATCTTGTCACCTCTGACTAAGGGAATTTTAGGATTTGTGTTCAC14.761904761904762No Hit
TAGTAGCATTGACACAACTACTTCAGTGCATGTGAGAGGAAGCAGTTCAA14.761904761904762No Hit
GCGAAAGCAGGGATTGTCACTGGTTAAGCTCACCACTGCTCCCAGCATGC14.761904761904762No Hit
GTTTAGTAACTCTTCATATTTTTGTATTAGTACATTTAGGGAAGCATTGG14.761904761904762No Hit
ACAATATACTGGACCACAACAGCCTGTCTAAAAATTACGCAAAGGATTCT14.761904761904762No Hit
GTCAAGACCTGAGCCCGTGCAATAAAGGATAGGAATGCAGCACCGCAAAT14.761904761904762No Hit
CTCCTGATTTATATCCACAAAAATCAGTAGAACACTTGAGATTTGTGGGA14.761904761904762No Hit
TTGCTCCAGCAAGAGGAGAAGCTCAAGTAACTAATTTGTTCTAGACATGA14.761904761904762No Hit
CAGAATTTACGAAGCATCGCCGCAATGTGCAGTCACAAAGGAATTCATCA14.761904761904762No Hit
CCTCAAATATAATCAATATCGAGAGAATAATAGAAAATACAGATCTAAAG14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)