FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A4a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A4a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGAAGTAGTTTTAAGTCTTGCATAAATTTTATTTGTTAGAAACTATTCT18.333333333333332No Hit
CCCCACGCTGAGCCCAGGCCCCTACCCTCTGAAGGTGTTTCCCATGTGAT18.333333333333332No Hit
GGTATTTCCTCCACTCCTGGTCCGTATGGCCCAGTATCTTCTTCTCAGGT18.333333333333332No Hit
ATACAGATGAAGCCACATCTAGGGTGGAGTCTGCTGTCCTGAGATGATTT18.333333333333332No Hit
GAACAGAGCTCCATATGGGCCTCAATAACAGGAACCGTAGATCATCACAC18.333333333333332No Hit
CCCTACTCCACTGTTCTCTGGGTGGGAGCTGGATATACAACTTCATGAGG18.333333333333332No Hit
CGACAAAATTGAACCAGACTAGAGTACCCCACCACGCCCCCACAGATAGC18.333333333333332No Hit
GGGGAAGGCAGGAGAGGCTCCTTCTACTGCCAGCCGGAGCAGACACGCAG18.333333333333332No Hit
TATGTCGACGGCTTGTTCATCAGTTGGATTCTGTCTAAGGCTGTCCACAA18.333333333333332No Hit
CAATAGAGAGGATGGTGCTTTCTGCTTTTGATGAGAGAAGAAATAAATAC18.333333333333332No Hit
GAGCTGAGTGGATTCTTTACGACTTAATTGTAATACTGTCGCTTATAAAA18.333333333333332No Hit
CATTTAGTTATATTTTGATCTTCTTTTATCGTGTAACTGATCGATAAATT18.333333333333332No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)