FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGAAGTAGTTTTAAGTCTTGCATAAATTTTATTTGTTAGAAACTATTCT11.7857142857142856No Hit
ATATATACTGTTTTGGTCATCACTAGTAGATGGCTGGTGCATGACACATA11.7857142857142856No Hit
GTTTCTGGATGTGCTCGAATGGGTCTCTACAGTGTAGAAAATGTACTCTC11.7857142857142856No Hit
CCCTACTCCACTGTTCTCTGGGTGGGAGCTGGATATACAACTTCATGAGG11.7857142857142856No Hit
CTCACTATCAGGGGAGCAGCAGGGGGGAAACTGTCCCCAGAACCCAAGCC11.7857142857142856No Hit
GGACTGGAGGGTGCAGTTCTCCGGGACCACATCTGCAGGGTGGGCAAAAT11.7857142857142856No Hit
GTTAACAGAGTGTGTTACTGTTACATTCTTTTATAGTACTGTGTCTACAG11.7857142857142856No Hit
CATATATACAGCCAAGAACTAATCAGAGGTCGACCCAAAGAGAACACAAT11.7857142857142856No Hit
GAGCTGAGTGGATTCTTTACGACTTAATTGTAATACTGTCGCTTATAAAA11.7857142857142856No Hit
GTATGGGCTTGCAGTAGCAAGTGGGCATGACTTTGAAAGGGAAGGGTACT11.7857142857142856No Hit
CCCCACGCTGAGCCCAGGCCCCTACCCTCTGAAGGTGTTTCCCATGTGAT11.7857142857142856No Hit
GTAGTAAGGCTAGCATAAATCTTATTTGATCGAAACTATTCTCTCTCTCT11.7857142857142856No Hit
GTAGATAATATAACTATTAATCATGTCAATCAAGTAATGTTTAGTTGCAA11.7857142857142856No Hit
GCCTCAGACTCCCCACGCTGAGCCCAGGCCCCTACCCTCTGAAGGTGTTT11.7857142857142856No Hit
GATGAAAGATATCTAAAATTCAAGAAGGCCTATAATAATCTGCTTTCTCT11.7857142857142856No Hit
GTGTTACATTCATCTGACCTGAGATGAATAATCAATTTGTGTCAACAATA11.7857142857142856No Hit
TCTCCATACAACTCAAGATTTGAGTCAGTCGCTTGGTCAGCAAGTGCTTG11.7857142857142856No Hit
GCACTTTAAAACTGCCTAGTCTGATTAGAGGCCACAATAGCCTACGCTGC11.7857142857142856No Hit
TCATAGATCATCTGGTTCTTGTGGGGTGTGTGTGTCAGAATCACATGGGA11.7857142857142856No Hit
ATTTACAACAGGATGGGAAAAGAGAGCACTGAATCTCAAATTGTACTAAA11.7857142857142856No Hit
CACCAACCCCAGGCCGCACCTCCCCAGCTGTGATGCAGCCTCCTCCGGGC11.7857142857142856No Hit
GGAATGGATCACAGAATGTGCTCTCTAATGAAAGGTGACAAAATTCAAAG11.7857142857142856No Hit
GGACCAGGCGATCATGGATAAGAACATAGTACTGAAAGCGAACTTCAGTG11.7857142857142856No Hit
CGACAAAATTGAACCAGACTAGAGTACCCCACCACGCCCCCACAGATAGC11.7857142857142856No Hit
GAGCCCAACCTTTGAGGGTCTCAGTCTATCTTTCAGCTCCCCTGGGGCTG11.7857142857142856No Hit
AGCCAACATTTCGTGGGTCGCTCTATGGAGGTCACTCACTGTGTGGCACC11.7857142857142856No Hit
ACGAAACAGTCTACCTGAAAGCTTGACATGCTGTTGGAGCTGTCTCTTAT11.7857142857142856No Hit
ATCATGACCCAAGCTGAAGGCAGAGGCTTTAAGCCACTGAGCCACCCAGG11.7857142857142856No Hit
CTCAAAGTGAAAGCACAAAACCATGACGGAATACAAGCAGGAGTGGAAAG11.7857142857142856No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAGGCTAA11.7857142857142856No Hit
CTGTGGGTCATTGATGCGGCAAAATAGCAGAGTCACAACCTGCAGTTCTG11.7857142857142856No Hit
GAACAGAGCTCCATATGGGCCTCAATAACAGGAACCGTAGATCATCACAC11.7857142857142856No Hit
TATGTCGACGGCTTGTTCATCAGTTGGATTCTGTCTAAGGCTGTCCACAA11.7857142857142856No Hit
GCAAAAGATAATACCAACTCTAAACATAAGAGTCCAACATTCCATCATAT11.7857142857142856No Hit
AAAGCAGGGTGGGAGGGGGCAAGGTTACCAGGAAGCAGGGCTGTCAGGGC11.7857142857142856No Hit
GGTCTATCCCGACCAGTGAGTACCCTTCCCTTTCAAAGTCATGCCCACTT11.7857142857142856No Hit
ATACAGATGAAGCCACATCTAGGGTGGAGTCTGCTGTCCTGAGATGATTT11.7857142857142856No Hit
ATCTTGGGGGGCTATATGAAGCAATCGAGGAGTGCCTGATTAATGATCCC11.7857142857142856No Hit
CCTCTGGCAACCTGGTCTGGAAATCTCTCTCCACAACCTGAGGCCCCTGC11.7857142857142856No Hit
GGGGAAGGCAGGAGAGGCTCCTTCTACTGCCAGCCGGAGCAGACACGCAG11.7857142857142856No Hit
TACATATGAGGATGACAAAAATGCAGTTTGGTTCATAATCTGAGTACTTT11.7857142857142856No Hit
CAATAGAGAGGATGGTGCTTTCTGCTTTTGATGAGAGAAGAAATAAATAC11.7857142857142856No Hit
GTTCAGAATACAGACCTAACAGTGCTGGATTGTATAAGAAATTGCTTCTT11.7857142857142856No Hit
GGGCTAAATACCACGGTACAGGGAATGAGCCCCAGATGGAGCTCACAGCT11.7857142857142856No Hit
GTTTCATAAGAGGAAATAAAGTGATTCCAAGAGGAAAGCTATCAACAAGA11.7857142857142856No Hit
GCAAGTTTCCTCATTGAATGTTCATGTTATCTTCTCCGGGTTGAGGATAA11.7857142857142856No Hit
GGTATTTCCTCCACTCCTGGTCCGTATGGCCCAGTATCTTCTTCTCAGGT11.7857142857142856No Hit
CTGTATATTTTCAGAGACTCGAACCGTGTTACCATTCCATTCAAGTCCTC11.7857142857142856No Hit
ACTTTGAGGATATTGAAAATTATTTAATAAGCAACCCTTGTCATTCTTCA11.7857142857142856No Hit
GTTTGAGATATTCCCCAAGACAAGTTCATGGCCCAATCATGACTCGAACA11.7857142857142856No Hit
GGTAATTAATTCCATTACATCCTTGAAGAACTAGATTATACTTCATGACT11.7857142857142856No Hit
CATATTTAAACATCTGCAACAAGAACTAAGCAACTGGACAGTAATAGCAT11.7857142857142856No Hit
CTCCCTTAATTATGTATTCAGTAGCCCTGCAGAGGGACACTTATTCTGTA11.7857142857142856No Hit
CTGCAAGATAGACTGAGACCCTCACAGGTTGGGCTCTGTGTCCCCACCGA11.7857142857142856No Hit
CATTCATAATTCATATGACCAACATATTATTATAAATTGGATAAGCTGAA11.7857142857142856No Hit
CATTTAGTTATATTTTGATCTTCTTTTATCGTGTAACTGATCGATAAATT11.7857142857142856No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)