FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCCTGGCTTTAAAGTTGAGAGAGTTGCCTGGGAATACTTTCGATGCTT12.7777777777777777No Hit
TCCTTGTTCATTCCTCTCTTGAATCATGTCCATTATTCACATGCTGTATC12.7777777777777777No Hit
GCTAAAGACAAGCCAAATCTTGTACACTAGGAATAAGTGAATTTTATTAG12.7777777777777777No Hit
TAACTATAAATCACGAGTGACAACTTAAGTTCAATGAATCATAAAATATC12.7777777777777777No Hit
GAACTATAACACAATAACAAAAAATAAATAGAGAGCAAATTCAAATAGTA12.7777777777777777No Hit
GGAACAATTTCTCGAATAGATTGCAGCACTTCTGGTACATCTGTTCATCC12.7777777777777777No Hit
TCTGTGTTCTTTCCTGCAAAGACACGTTCCAGTCTCTGCGCGATCTCGGC12.7777777777777777No Hit
CCCCAATGCCGTGATCGATCCAAGGCAAACACTTAGATTTGCTCTTATGA12.7777777777777777No Hit
GAAAAAAATCGAAAAATAAAAAAATCAAACAAATAAAAATTATGAAATAC12.7777777777777777No Hit
CGGCTGGTCTTCTCACTATATCCAAGGTATTAGAGGTAAATTTCTGGTAT12.7777777777777777No Hit
GGGCATGGAAGGAGCCACTCTGGGCTGGGCTGTCTATGCTGATGACTGTT12.7777777777777777No Hit
CTGGGCAGATGTTTGAATTTTAACTTTGAGGATATTGCACATTCTTTCAT12.7777777777777777No Hit
CGGTTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGAT12.7777777777777777No Hit
CAGAAAGGTAGCGCGAAGTAGGTACAGCTGCAATTGTCATTCTAAGTGTC12.7777777777777777No Hit
GTCTAAGGCAGACGCCCAACGACTGAGCCTCCCAGGCGCCTCTCTTCCCT12.7777777777777777No Hit
TCCATGTACATTCCTCTCTCGAATAAAGTCCATTATTATCTTGAATGATG12.7777777777777777No Hit
GTTCAGAACAGAATAAATAACCAAACAAGTGTAGAGAATCCAAAAAAAAA12.7777777777777777No Hit
GTTCACAGAGTAAGAAACTGATAAAATCATTAATAGTACTGAGTCAACAG12.7777777777777777No Hit
CCCTTACACCCATTGCCTCAGCCGCCTCCATCCCTACCGGCACCGTCACT12.7777777777777777No Hit
CGATTACTGGCCACTAGTAGAGCCGTGAGAAAAAATAACATTCGAAGCAA12.7777777777777777No Hit
GTCTTCTAGAAGGTTAAAAGAGTGAGTTACTGGTACATTCTTTTCTAGTA12.7777777777777777No Hit
GCAGGCTCCCCACCCAGCAGGGAGCCCCATGCAGGGCTCAATCCCAGGAC12.7777777777777777No Hit
GATATGTGGCATCATTCAGGTTGGAATGCCAAATCATGATATGAGTAAGA12.7777777777777777No Hit
ATACAGAGAATCGATTGGATAAACTGAGAAGACAATGGGAGACCTTCACT12.7777777777777777No Hit
GTTGTTAAGTCAAATAAAAAGGGACTATAGCAGACTTACTGACAGCAATA12.7777777777777777No Hit
AAGCCATGGCGTCTCAAGGCACCAAACGATCATATGAACAAATGGAGACT12.7777777777777777No Hit
TTTGTTACGATAGCGCAATTCTGACAATATTACAATATTCACCAAAACCA12.7777777777777777No Hit
GTTAAAGCAATTATTAGTATCAATGTATCTAATAGTTTAAAGATTAAACT12.7777777777777777No Hit
CCAGTGCTCAGCTGTGCATATGGATGGATGCTCAGGGCTGATATCTGAGC12.7777777777777777No Hit
TTCCTAGCAGAAAAGGTAATGGTGAACTTTCTCCAACTATTGCTCCCTCC12.7777777777777777No Hit
CTATTTCTCCCTCATAAGTGAAAGACATTAGTAGTATAAAGTTATCTAAT12.7777777777777777No Hit
GAAAATAGTACTGAAAGCTAACTTCAGAGTAATCTTTAACAGATTAGAGA12.7777777777777777No Hit
CCCAGCAGGGAGCCCCATGCAGGGCTCAATCCCAGGACCCCAGGCTCATG12.7777777777777777No Hit
GCCCTGGGCAGACAGCCAGGAAGGGAAAGACAGAAGGCGCTTCCTACCTT12.7777777777777777No Hit
TACTAAGTGTAAATCATTATTGCTACATAAAGATCCAAACAATGACTTGT12.7777777777777777No Hit
GTTTTTATCATGCTTCTGAAATCCTAATTTTAAATACATATTATAAACTG12.7777777777777777No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)