FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAGATCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA13.225806451612903No Hit
TTGTCAAAATAGACCTAGAGTAAAAAACTACCTTGTTTCTACCTGACTCA13.225806451612903No Hit
GAGTAAGACATGCTGGATCGTCTTCTCAATTGTTTGCTAGCATTCAAACA13.225806451612903No Hit
GACCAGCACTGTAGCTAGGATGAGTCCCAATAGTTCTAATTTCATGTAAC13.225806451612903No Hit
ATGTATAGGTTATCATGCGAACAATTCAACAGCCACTGTAGACACAGTAC13.225806451612903No Hit
ACGGACAGGTGCTGGTCTTCACACTCCCGCTCACAGACCAGGTCTCTGTC13.225806451612903No Hit
ACACACAGGACTGTGGCCAATAATCCCAGCTTTTAATATTCCTGTCTCTT13.225806451612903No Hit
ACATTAGATCTCTCAGTGCTTATATTCTCACCAAATCATTGTCATATACA13.225806451612903No Hit
GCTATTAGCTGACCGCTCTTTTATTACATCGATATCTTGACTGATTGAGA13.225806451612903No Hit
GGTAATATATGTGGCCTTCCCTCCGTGTTACTCCAATTTCAATGAACCGT13.225806451612903No Hit
CATGTTTTAATGTTTTGTTTCTATTACTGATCTTTTGTGTTTAAATAAAA13.225806451612903No Hit
GAAATTGAAGAGGGAAAAAACAAACTGGAATACAATCAATGCTAATTGAG13.225806451612903No Hit
CAACATGGATAGAGCAGTTAAACTATACAAGAATCTCAAAAGAGAAATAA13.225806451612903No Hit
CTTCCAAGACTGTATGCAGCATCTCCAGTATAACGGATCTGTCTCATAAA13.225806451612903No Hit
GAAAAGGAGTTTTAGGATAGAACTGCAAACCGAGTCTAGCTCCTGTCTCT13.225806451612903No Hit
TGCCTGACCTGGGCTGGCTGTCCCCCCTAACACTCTCTGGGGATCTTACG13.225806451612903No Hit
GGGCTATTCTAAACAAAATATAGCTTTGTGACAGTTCATTGATTCTTCAA13.225806451612903No Hit
CCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTTGGAAACAAATCGTG13.225806451612903No Hit
TGAAACATCCATATTTTCTTACCTATTTTAATGTATCTTTCACGTAAAAA13.225806451612903No Hit
GAGCAAAAGCAGGGAAACATCTGGATGTATAAAAAAATGCTCATGATCTC13.225806451612903No Hit
CTTATTAGGATGTCAAAAATGCAGTTGGGTTCCTCATAGTAGTAATTGAA13.225806451612903No Hit
GTATAACTATAATGTTAGATTGAAGTTCAAGTATTCAAAGCTTTTCAAGC13.225806451612903No Hit
CTTTCTATCATCCCGTCAGGCCCCCTCAAAGCCGAGATCGAGCAGAGACT13.225806451612903No Hit
CCAATGAAGAGATACCCTTTGAGCAAATCTTTTCAGAATTGGAGACGATC13.225806451612903No Hit
ATCTTATATTTTTGAGGAATTGTCTTCTAGATATCATAGTTAAACAAGTT13.225806451612903No Hit
GTTGTATATGAGGCCCATGCAACTGGCAAGTGAACCAGTAGAATAGCTTA13.225806451612903No Hit
ATACATTTGAAAAAAAGACGATCAGTAATCCACAATATCAGGTGCAAGAT13.225806451612903No Hit
CATAAAATTTAATGTGTGAAAAAACCTTTCATGTATCCTTCAGATTGATT13.225806451612903No Hit
GTCACCCCCCAACTGCATAAAGCCAAGAAACAAAGTCCTACCTTCAACAA13.225806451612903No Hit
CTACACAGCCATCTGCGTTGCATTTGGATCTGCTGCAATCATGTCATCAG13.225806451612903No Hit
GAGATTAAGAGACCAGAAGCCCATTTATGGATCCTGCTCTAAGTCACTTT13.225806451612903No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)