FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A11a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A11a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCATGTACAATCTGCCTAGTCTGAATAGAAACCAACATGGACAAAGCAG110.0No Hit
ATAACCCGAATAAAATAAAATCTAAAAAAAAAAGTTAACTGAAAACAATA110.0No Hit
AATGCAATGAGAACTATTGGGACTCATCCTAGCTCCTGACTCTTATACAC110.0No Hit
GTCTTTTTTTCAAATGTATTTATCGTCGCTTTAAATACGGTTTGAAAAGA110.0No Hit
ACTGAACAATGACAAGCAATTTTCGAGAATCATCAGAAAACAACTCAATT110.0No Hit
TGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAAACCCAGGGATC110.0No Hit
GTGTTGTCCCAAGTTATTGTTAAAGAAATATCTTTGTCTTGTGAATTATT110.0No Hit
CTACTGGGAGAAAACTTGTTTTACGTACCAATTATCTTTCTAGCATTTAC110.0No Hit
ATTCTCGCCATAATGTATTGATATGCGCTGAGTTTTCTGCTCTCGCTATT110.0No Hit
GTAAGCATAGAAAATACTAACATTTCCACAACAAAGAAAGAGCATTTGCA110.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)