FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A11.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A11.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACAAAATAGTCTTAATTTTCATGTGTAAATGGTTCATGATTTACTGTA12.7027027027027026No Hit
ATCGTGGACTGGTGTATCTGAAATGATAATACCAGATCCAGCATTTCTTT12.7027027027027026No Hit
CTCTTGATAGTGTCTGTTATTATGCCGTTGTACTTTAACACAGCCACTGC12.7027027027027026No Hit
CATTTTCCTGGCACGGTCAGCACTCATTCTGAGGGGATCAGTTGCACATA12.7027027027027026No Hit
GTGTTGTCCCAAGTTATTGTTAAAGAAATATCTTTGTCTTGTGAATTATT12.7027027027027026No Hit
GCCCACACCCATCCAAGAAATTCCAAAACGTCAGCTATATGAACTCCTAC12.7027027027027026No Hit
GTATAACTAAGTGGCAACTTCACACAAATGAATTTACAGAATTTCCAAGA12.7027027027027026No Hit
CCTCCATGGCCTCCGCTGCCTGTTCACTCGATCCAGCCATCTGTTCCATA12.7027027027027026No Hit
CAGGCACTCCTTCCGTAGAAGGCCCTCTTTTCAAACCGTATTTAAAGCGA12.7027027027027026No Hit
GTCTTTTTTTCAAATGTATTTATCGTCGCTTTAAATACGGTTTGAAAAGA12.7027027027027026No Hit
CTATTGCAAAGATGATAAATTTTCATTACTATTATTATATTGATAAGTAA12.7027027027027026No Hit
GAGCGAAGCACAGTTCACTATTGTTAAAAGAAACAAAGACTGTGATAGTA12.7027027027027026No Hit
CTACTGGGAGAAAACTTGTTTTACGTACCAATTATCTTTCTAGCATTTAC12.7027027027027026No Hit
AGTTCGCTTTCAGTACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGC12.7027027027027026No Hit
AGAAAAAGCAGGTAGATATGTAACGATGAGTATTCTAAAATAGGTCGAAA12.7027027027027026No Hit
CAATGAACAAAGAGGAAATAGAGATAACAACACACTTTCAAAGAAAAAGG12.7027027027027026No Hit
ACTGAACAATGACAAGCAATTTTCGAGAATCATCAGAAAACAACTCAATT12.7027027027027026No Hit
TGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAAACCCAGGGATC12.7027027027027026No Hit
CAATATATTGTTTCTCCAACTCTTGATAGTGTCTGTTATTATGCCGTTGT12.7027027027027026No Hit
GTGTATCTCCATGATAAAATTAGACAAAAATCAATAGCGATAAAAAAAGC12.7027027027027026No Hit
GGGTAGTTAATCGCGCAAAGAGTGTCTTCGAAGCCCTGCCGTATACTGGC12.7027027027027026No Hit
GTAAGCATAGAAAATACTAACATTTCCACAACAAAGAAAGAGCATTTGCA12.7027027027027026No Hit
GTGTAATATTAAGTTAGCAATTCCAATTGTCATACCGACAGCACAACTGT12.7027027027027026No Hit
AGCATGTACAATCTGCCTAGTCTGAATAGAAACCAACATGGACAAAGCAG12.7027027027027026No Hit
CATATAGACTGTTGAATACATTGCAGCAAACTTGTAACTTTCGATTTTCG12.7027027027027026No Hit
ATAACCCGAATAAAATAAAATCTAAAAAAAAAAGTTAACTGAAAACAATA12.7027027027027026No Hit
TTGATACTCTCGTCATTTCAGAAAATATCATTGGGATCTAGCAACAGATA12.7027027027027026No Hit
CTGTGCAGCCATGGATGACTTTCAGCTGATCCCAATGATAAGCAAATGTC12.7027027027027026No Hit
AATGCAATGAGAACTATTGGGACTCATCCTAGCTCCTGACTCTTATACAC12.7027027027027026No Hit
ATAAGAAGCAATCGAGGAGTGCCTGATAAATGATCCCAGCTATTAGCTTA12.7027027027027026No Hit
TAACTAAGGTGTAGTACTTTTAGTGGTAAAATGTATATCGACGACATAAG12.7027027027027026No Hit
GTCTCAATTTTGTGCTTTTTACATATTTTGGACATTTTCCAATTGTGATC12.7027027027027026No Hit
CCTATTAACATTATCATCCACACTGAGACTCTCAAATTCAAAGTCAATTA12.7027027027027026No Hit
ATTCTCGCCATAATGTATTGATATGCGCTGAGTTTTCTGCTCTCGCTATT12.7027027027027026No Hit
GTTAGAGTGTGTTACTGTTACATTCTTTTCTAGAACTTTTTCTACAGAGT12.7027027027027026No Hit
CACTAAGCTATTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATAC12.7027027027027026No Hit
GAAAATAAAATAGTACTGAAAGCGAACGTCAGTGTAATCTTGAACCGATT12.7027027027027026No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)