FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A10a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A10a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGGTCTATAATCGGTTAAAGATTACACTGAAGTACGCTTTCAGTACTA110.0No Hit
GTCCCTCAGAATCACTGAGTTTTAGTTCAGTGCACATTTGGCTTTAGAAT110.0No Hit
GCAAGGTCTGGAGAAGACGAACCCACAGAGTCACTCTATACACCTCTTAA110.0No Hit
GAACTATTGGGACTCATCCTATCTCCAGTGCTCGTCTGAAAGATGACCTT110.0No Hit
GTTATACTTCAAGCAGTAGGTGTAAGGCTTTCAGAAATGTGATGTGTACG110.0No Hit
GGATACACCATGGACACAGTAAACAGAACACACCAATACTCAGAAAAGGG110.0No Hit
CTTTACACAGTAGAGCATAAAATCATAACGGGAACCTAGGCAAACTACGA110.0No Hit
ATGTAGGATTTGCTGAGCTTTGGGTATGAATTTCCTTTTTTAACTAGCCA110.0No Hit
TTAAAAAACAGGAAGTTATTAAACAGAAAATTCAAATGGATCAAATTGAG110.0No Hit
AAGTAGCACAAGATCTAAGAGCTTTATCGTTTCCGCTTAGTTAATGATAA110.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)