FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_A10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATTTGTAAGGCTTGCATAAATGTTATTTGTTAGAAAATATTCTATGTC15.555555555555555No Hit
GTCTACACTGTCTCATGAATTCATCGAATGATAAACTATACATAATCTGT15.555555555555555No Hit
CAAGGTCTATAATCGGTTAAAGATTACACTGAAGTACGCTTTCAGTACTA15.555555555555555No Hit
GAACTATTGGGACTCATCCTATCTCCAGTGCTCGTCTGAAAGATGACCTT15.555555555555555No Hit
GTTATACTTCAAGCAGTAGGTGTAAGGCTTTCAGAAATGTGATGTGTACG15.555555555555555No Hit
GTGTTACCATTACATTCAAGTCCTCAGATGAGGACCCCAACTGCATTTTT15.555555555555555No Hit
GGATACACCATGGACACAGTAAACAGAACACACCAATACTCAGAAAAGGG15.555555555555555No Hit
ATGTAGGATTTGCTGAGCTTTGGGTATGAATTTCCTTTTTTAACTAGCCA15.555555555555555No Hit
GGAAAATGCAACTGGCAAGTGCAACAGTTGAATAGCTTAGTGAAACATCC15.555555555555555No Hit
CAATAGAAGTATTTAGATCTAATTGCAAAACAGCTAATGAGTCAGTAATG15.555555555555555No Hit
GTCCCTCAGAATCACTGAGTTTTAGTTCAGTGCACATTTGGCTTTAGAAT15.555555555555555No Hit
TCAATAAGCTATTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATA15.555555555555555No Hit
GCAAGGTCTGGAGAAGACGAACCCACAGAGTCACTCTATACACCTCTTAA15.555555555555555No Hit
GCTACGATAAATACATTTGAAAAAAAGACGATCAGTAATCAACAATATCA15.555555555555555No Hit
GTGTCTACAGTCTCTGTTGAATTGTTATCAAGATAACCTATACAAAAAGT15.555555555555555No Hit
CTTTACACAGTAGAGCATAAAATCATAACGGGAACCTAGGCAAACTACGA15.555555555555555No Hit
TTAAAAAACAGGAAGTTATTAAACAGAAAATTCAAATGGATCAAATTGAG15.555555555555555No Hit
AAGTAGCACAAGATCTAAGAGCTTTATCGTTTCCGCTTAGTTAATGATAA15.555555555555555No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)