FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_G2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_G2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGAAGGCCCTCTTTTCAAACCGTATTTAAAGCGACGATAAATACATTT14.3478260869565215No Hit
GACCCATATATAGAAGAGTAGACGGAAAGTGGATGAGAGAACTCATCCTT14.3478260869565215No Hit
GTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCT14.3478260869565215No Hit
GGACAAGTTAAATTCATTATTTTTGCCGTCTGAGTTCTTCAATGGTGGAA14.3478260869565215No Hit
ATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGAT14.3478260869565215No Hit
CCAATTGACTCTTGTGAGCTGGGTTTTCATTTGGTCTTATCAGGCTGACC14.3478260869565215No Hit
CTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGATGAAGGCACATC14.3478260869565215No Hit
CTTGAGGCTCTCATGGAATGTCTAAATACAAGACAAATCTTGTCACCTAT14.3478260869565215No Hit
GGGCTGGCCGTAGGCCCTCCTCGAGTTTCTTAAAGCATAGTTGGCCGAGG14.3478260869565215No Hit
GGGCGTGGTGTCGTCCTCAAGAATGGTTCAATTTTGGCGTTCACTTCTTT14.3478260869565215No Hit
CAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTTATCT14.3478260869565215No Hit
GAATAGTTTCGAACAAATAACATTTATGCAAGCCTTACAACTACTGCTTC14.3478260869565215No Hit
GTTTCATAAGAGGAAAGAAAGTGATTCCAAGAGGAAAGCTTTCCACAAGA14.3478260869565215No Hit
ACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCCCAGGG14.3478260869565215No Hit
GCCCTGCAGTGGGACACTTCTGCTGTAAAATAGTTCCTCCTCATGCTTGC14.3478260869565215No Hit
TCCCAGCACTGGGATGCTCTTCTAGGTATTTATTTCTTCTCTCATCAAAA14.3478260869565215No Hit
TTGTTGTATAGCATTGTGGGATCTTGTGACCATTGAATTTTCACAATTTC14.3478260869565215No Hit
AATGGAGACTGGTGGGGAGCGCCAGGATGCCACAGAAATCAGAGCATCTG14.3478260869565215No Hit
AACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAG14.3478260869565215No Hit
AACAATAGAGAGGATGGTGCTTTCTGCTTTTGATGAGAGAAGAAATAAAT14.3478260869565215No Hit
CTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTT14.3478260869565215No Hit
GAACCACAAAAGAGCCTGAATAGCCAAACAACCTTAAAACTGTCTCTTAT14.3478260869565215No Hit
AAAGACAACAGTGTAAGAATCGGTTCCAAGGGGGATGTGTTTGTCATAAG14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)