FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_F7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_F7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTTTTGCTTAATGCATCTTGGTTCAACTCCTTCCTCACACATGCACTG14.761904761904762No Hit
ATATAGCCCATCCACTAACAGGGCAGAGAGAGGAATTGCCCGCTAATTTC14.761904761904762No Hit
GTGCATCTCTTCTACCAAGCTGCTCCGAGTTACAGCCTTTTATAATAAAC14.761904761904762No Hit
GCCAGCTACTAGTGCTGACCAACAAAGTCTCTCTCAGAATGCAGATGCAT14.761904761904762No Hit
GTGAGAATGTAGGCTGCCCACTGATCTGGCCTGCGGATGGCGTTTGTTGA14.761904761904762No Hit
CTCCTGGAGTGTACATCTGCTCCCAGCACGTCCCTTGGGTTAAGTGCAAC14.761904761904762No Hit
CCCTGGCACTGGCCCTTTCTGACCTGGACTGTGGCAAAGGCTCCGGTGCA14.761904761904762No Hit
TAATTGAAGAAATGCGGCACAGATTGAAAGCGACAGAGAATAGTTTCGAA14.761904761904762No Hit
GCTGGATCCTGGGAAATCCAGAGTGTGAATCACGCTCCACAGCAAGCTCA14.761904761904762No Hit
GCCTCATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGT14.761904761904762No Hit
GTGGCAGGCCTGGTGGGCCTGGAACTATACAAGGTGGTGGGTGGGCCACG14.761904761904762No Hit
GAACTCATCCTTTATGACAAAGGAGAAATAAGGAGAGTTTGGCGCCAAGA14.761904761904762No Hit
GTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACAG14.761904761904762No Hit
GCTTTCAGGTAGACTGTTTCCTTTGGCATATCCGCAAGCGATTTGCAGAC14.761904761904762No Hit
AAATAACATTTATGCAAGCCTTACAACTACTGCTTGAAGTAGAACAAGAG14.761904761904762No Hit
TTCTTCCTGTCCTCTTGCAGGTTAAAACCCCCGTGGCCTTTGATTCCTCT14.761904761904762No Hit
GAAAGATGACCTTCTTGAAAATTTGCAGGCCTACCAGAAGCGAATGGGAG14.761904761904762No Hit
CACACATTATGTATAGGTTATCATGCGAACAATTCAACAGACACTGTAGA14.761904761904762No Hit
ACCTACAACAGTCAAAACACTGCTTACAACTTAGGACTGGGCTATACATC14.761904761904762No Hit
CAATGAGAACTATTGGGACTCATCCTAGCTCCAGTGCTGGTCTGAAAGAT14.761904761904762No Hit
AAGAAAAAGGAGAGTAAGAGACAACATGACCAAGAAGATGGCTGTCTCTT14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)