FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_F6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_F6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGTGAACACAAATCCTAAAATTCCCTTAGTCAGAGGTGACAAGCTGTCT13.4482758620689653No Hit
GTTGGATATGAGGACCATGCAACTGGCAAGAGCACCAGTAGATTAGCGTA13.4482758620689653No Hit
GGGTTTTATTTCTTCTCTCATCAAAAGCAGAAAGCACAATCCTCTCTATT13.4482758620689653No Hit
GCTGTGAACTGTGTATTCATCTTTTCAATAACAGAATTTACTTTGTTAGT13.4482758620689653No Hit
CACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATG13.4482758620689653No Hit
GTGTATGTGTATACAGATTTTAATAGGCCTACAGGAATTATACATATCTA13.4482758620689653No Hit
GATTCTAGGTGGCACGTTCTTAAAAATCGAGGACTTTTTTTTTTTCAAGC13.4482758620689653No Hit
TGAGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGT13.4482758620689653No Hit
CGCTGCATCTGCACTCCCATTCGCTTCTGGTAGGCCTGAAAATTTTCAAG13.4482758620689653No Hit
GGTGCAGCATATCCTTTTGTGGTGTAAACAGTGACACTGTGGGTTGGTCT13.4482758620689653No Hit
CATGGAGGTTGCTAATCAGACTAGGCAGATGGTACATGCAATGAGAACTA13.4482758620689653No Hit
GATTTAAGAGTATCAAGTTTCATAAGAGGAAAGAAAGTGATTCCAAGAGG13.4482758620689653No Hit
GTGTGGACCTTATGGCCATAATCAAAGAGGACACAGCAGGAAGGCAAGAG13.4482758620689653No Hit
ACCAAAAGCAGCTTCTGTGGTCACTGTTCCCATCCTGTTGTATATCTGTC13.4482758620689653No Hit
GGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTCAGTACTATGT13.4482758620689653No Hit
TCTTTGTCCTTGGGATCTTCTCTTCATTATCAATGTCATGTAGCTCTGCT13.4482758620689653No Hit
AGTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCATCGGTCTCACA13.4482758620689653No Hit
TATTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGAT13.4482758620689653No Hit
ATGTAACATTGCTGGCTGGATCCTGGGAAATCCAGAGTGTGAATCACTCT13.4482758620689653No Hit
GGTTGTAGGCTGGCCACTGCTCTGGCGTGCGGATGCCTTTTGTTGAGTGG13.4482758620689653No Hit
GTGGCCATCCATTTCCATGCTTCCTCGCACCTCCGCATTGCAAACTGTCA13.4482758620689653No Hit
AGTTAACTGTTGTGTGGAATACCTTACTCATTTATTTTCAATCTCTTTGT13.4482758620689653No Hit
GGTGTATTGCAATCGTGGACTGGTGTATCTGAAATGATAATACCAGATCC13.4482758620689653No Hit
CCTTTTCGTCCGAGAGCTCGAAGACTCCCCGCCCCTGGAAGGACAAATCT13.4482758620689653No Hit
GTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTTATCTCTTGTTC13.4482758620689653No Hit
GTCCTGGGATTGAGCCCCACATTGGGCTCTCTGCTCAGCAGGGAACCTGC13.4482758620689653No Hit
GCAAAGGGGAGAAGTTTTATTATTTGGACAGTGTCAAATGTCCCAAGCAC13.4482758620689653No Hit
AACTCATCCTTTATGACAAAGAAGAAATAAGGAGAGTTTGGCGCCAAGCA13.4482758620689653No Hit
CTTCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTTTTCG13.4482758620689653No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)