FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_F3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_F3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGGGAGCGCCAGGATGCCACAGAAATCAGAGCAACTGTCGGTAGAAT14.761904761904762No Hit
CCTCGAGGGTCATGTCAGAAAGGTAGCGCGAAGTAGGTACAGATGCAATT14.761904761904762No Hit
CCTCTCTATTGTTATGCTATTCTGGATTAGTCGTCCCTCATAATCACTGA14.761904761904762No Hit
GTAGTGAAGGTCTCGCATTCTCATCACAGTTACTCAAAGCGAATCTCTGT14.761904761904762No Hit
GAACAGACCCAGAAGTAAGTAATCATAGAGGGAGGCAAAGGAGAGGAGAG14.761904761904762No Hit
GCCTTACAACTACTGCTTGAAGTAGAACAAGAGATAAGAGCTTTCTCGTT14.761904761904762No Hit
ATCCTGGAGCTCTTCTTTCTTCTCTTTTGTTATTGCCAGCTGTGACTCTG14.761904761904762No Hit
GTGCAAGATCCCAATGATATTTGCTGCAATGACGAGAGGATCACTTGAAT14.761904761904762No Hit
TCCACCTACTAGTGCTGACCAACAATGTCTCTATCAGAACTGTCTCTTAT14.761904761904762No Hit
GGCTAATAGATTTCTTAAAGGATGTAATGGAATCAATGCTGTCTCTTATA14.761904761904762No Hit
GCATGAACCAGTCTCGTGACATTTCCTCGAGGGTCATGTCAGAAAGGTAG14.761904761904762No Hit
GTGTGGACCATATGGCCAGAATCAAAAAGTACACATCAGGAAGGCAAGAG14.761904761904762No Hit
AAACGTACGTTCTTTCTATCATCCCGTCAGGCCCCCTCAAAGCCGAGATC14.761904761904762No Hit
TTTTTCCAGGTGGTTGAGCTCTTTACATACTGCTGTGAACTGTGGATTCA14.761904761904762No Hit
AGAGATAAGAGCTTTCTCGTTTCAGCTTATTTAATGATAAAAAACACCCT14.761904761904762No Hit
GGTCGGGTTCGTTGCCTTTTCGTCCGAGAGCTCGCAGACTCCCCGCCCCT14.761904761904762No Hit
AAACAAGGGCACCTTAACAAAAGATGTATGAAAGCACAAACATGCTGCCC14.761904761904762No Hit
CCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTACTCCTACT14.761904761904762No Hit
CTATTAATGAATCTGGGCTCCTACAGACCCTTGTGGGGAATGCTTCCTCT14.761904761904762No Hit
TCAGTGTGCAGCCTACATTCTCAGTGCAGCGGAATCTCCCTTTTGAAAGA14.761904761904762No Hit
GACAATAACATCTCAATAAAGCAAGATATCCTAGGAATAAATGAGTGGTC14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)