FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_F2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_F2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTATATAGCAGAACTACTAGTATTGCCTTCATTTTTGTTGCTTTTGTTT14.761904761904762No Hit
TGTGAACAGATTGCTGATTCACAGCATCGGTCTCACAGACAGATGGCTAC14.761904761904762No Hit
GGATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAGTGCCTGTCTC14.761904761904762No Hit
GTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTCAGTAGTATGTT14.761904761904762No Hit
AACAAGGAGGTTTTTGAACAAATTACTTGTCAATGGTAAATGGCAACTCA14.761904761904762No Hit
CCCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTC14.761904761904762No Hit
TTCTTCCCTCATGGACTCAGGCACTCCTTCCGTAGAAGGCCCTCTTTTCA14.761904761904762No Hit
ATACTTAATTTCAGAGCATCCATCAGCAGGAACTTTGACCGCTGATGGCA14.761904761904762No Hit
CATAAATCCTGCCTGCCTGCTTGTGTGTATGGGCTTGCAGTAGCAAGTGG14.761904761904762No Hit
AGAGTAGAGCATAAACTATCTGGTGTTTTTAAAATCTGCAATATTGAGAT14.761904761904762No Hit
ATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGT14.761904761904762No Hit
GGGTGAGGGGATCAGTTGCACATAAATCCTGCCTGCCTGCTTGTGTGTAT14.761904761904762No Hit
GCCAAATCATGATATGAGTAAGACCTGCTGTTGCATCTTCGCCATTGTTT14.761904761904762No Hit
TGTATGGAGAGGGAACTTCACCAATAGGACAGCTCATTATGGTTCGATAT14.761904761904762No Hit
GCGGCAGCTGGTCAAAGAAATTCAATATCGAGAGAAAATAACAACGCAGA14.761904761904762No Hit
GACAATAACTTCTCAATAAAGCAAGATATCGTAGGAATAAATGAGTGGTC14.761904761904762No Hit
GGTATATAGAAGAGTAGACGGAAAGTGGATGAGAGACCTCATCCTTTAGG14.761904761904762No Hit
CACAAATCCTAAAATTCCCTTAGTCAGAGGTGACAAGATTGGTCTTGTCT14.761904761904762No Hit
TTCTTTCCTCTTATGAAACTTGATACTCTTAAATCTTCAAATGCAGCAGA14.761904761904762No Hit
CTGCTGTTCCTGTTGATATTCTTCCCTCATGGACTCAGGCACTCCTTCCG14.761904761904762No Hit
GGCCTGGGAAATCCAGAGTGTGAATCACTCTCCACAGCAAGCTCATGGTC14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)