FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_F10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_F10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAGTGAAC13.571428571428571No Hit
AAAGCAGGGAGAGCGCAGCAGGCAGCAGGATAAGTAGGCTTCCCACTGAG13.571428571428571No Hit
ATAACAGACACTATCAAGAGTTGGAGAAACAATATATTGAGAACACAAGA13.571428571428571No Hit
GGTCTTGGTCATGTTGTCTCTTACTCTCCTTTTTATTTGAAAGCTGTCTC13.571428571428571No Hit
GACTAAAACCACAGAAGTCTTACCTTTTCATCTTTGATTTTCCCTTATTT13.571428571428571No Hit
CTGTTTCCCCTGCTTGTGCGCTCTTTCTCTCTCTCTGTCAAATAAAATCT13.571428571428571No Hit
GGTCTATCCCGCCCAGTGAGTACCCTTCCCTTTCAAAGTCATGCCCACTT13.571428571428571No Hit
ACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCAT13.571428571428571No Hit
AGTAGATGGATGGTGAATGCCCCATAGCACGAGGACTTCTTTCCCTTTAT13.571428571428571No Hit
GTAGTTAAAGCGACGATAAATACATTTGAAAAAAAGCCGATCAGTAATCC13.571428571428571No Hit
TAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGACATGA13.571428571428571No Hit
CTCCAGTGCTGGTCTGAAAGATGACCTTCTTGAAAATTTGCAGGCCTACC13.571428571428571No Hit
GGCAGACACTAACCGACCAAGCCACCTAGGCACCCCAAGATTAATCCATT13.571428571428571No Hit
CCCTTTTGAAAGAGCAACCGTTATGGCAGCATTCAGCGGGAACAATGAAG13.571428571428571No Hit
GCGCAAGAGCAGGTAGATATTTAAAGAGGAGTCTACTCCCCGAGGTCTAT13.571428571428571No Hit
GGCTATATACAGTAAAGACAACAGTGTAAGAATCGGTTCCAAGGGGGATG13.571428571428571No Hit
CTATGGGGACTCATCCTAGCTCCAGTGCTGGTCTGAAAGATGACCTTCTT13.571428571428571No Hit
TATTTGGACAGAGTCAAATGTCCCAAGCACATCCCGCATTTTCTGGAACA13.571428571428571No Hit
GGGGGGTTCATCGATTATGAGGAGCTAAGAGAGCAATTGCGCTCAGTGTC13.571428571428571No Hit
CAATATAAACACTGCCTGTTCCGCCGGCTACTGGGAGAAACCTTGTTTTA13.571428571428571No Hit
GGATTAGAGAAAGTGAATAGAATGCAAAAAGCACTTAAGAGGTTGAATCC13.571428571428571No Hit
CCCTGGGATCATGACCTGAGCCAAAGGCAGACACTAACCGACCAAGCCAC13.571428571428571No Hit
GAGCAAAAGCAGGGTAGATAATCACTCAATGAGTGACATCGAAGCCATGG13.571428571428571No Hit
TTATCACTGTTACTCCAATACTCATGTCAGCTGATTCATTTACTCCAGAC13.571428571428571No Hit
ATTAGAGACCTTGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAG13.571428571428571No Hit
AACTTATCCTTTATGACAAAGAAGAAATAAGGAGAGTTTGGCGCCAAGCA13.571428571428571No Hit
GGTTGTCACCTCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCTCACC13.571428571428571No Hit
AGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCG13.571428571428571No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)