FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_E5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_E5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTAACTGCTCTATCCATGTTGTTCGGGTCCCCATTCCCATTTAGGGCA110.0No Hit
CATATATACAAGAGTAGACGGAAAGTGGATGAGAGAACTCATCCTTTATG110.0No Hit
ATATAAATAAGACAGGGACATTTGAATTCACAAGCTTTTTTTATCGCTAT110.0No Hit
ATGCAATTGTCATTCTAAGTGTCTCGCTGGATTCCTCTTTCAAGATCCAT110.0No Hit
GTCTCTATCAGAATGCAGATGCATATGTTTTTGTGGGGTCATCAAGATAC110.0No Hit
CTCTATTGTTATGCTATTCTGGATTAGTCGTCCCTCATAATCACTGAGTT110.0No Hit
TCTTTCTATCATCCCGTCAGGCCCCCTCAAAGCCGAGATCGCGCAGAGAC110.0No Hit
CCATTACTTGGTCCATCGGTCATTACAGTAAAGACAACAGTGTAAGAATC110.0No Hit
ATCGGAATACTGCCCGACATGACCCCAAGCACGGAGATGTCGCTGAGAGG110.0No Hit
ATCGGTCTCACAGACAGATGGCTACTACCACCAATCCACTAATCAGGCAT110.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)