FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_E4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_E4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTTAGACAGAATCCAACTGAGGAAAAAGCCGTAGACATATGAAAGTCA16.25No Hit
GTATTATCACACAAGGACTTTTAAAACATTCGTATACCAAGTCCAGTAAG16.25No Hit
TTATTATTTCCTTCCTTTGGTTGGTTTCGGCTTTGTTGTTCTTTTTCTAC16.25No Hit
CAGCACTTCTGGTACATCTGTTCATCCTCAAGAATTCCCCTTTGGCTTTT16.25No Hit
AAACAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTTA16.25No Hit
GCTATTAACAGGGGTCTGAGAGGCACACACAGTGGTGATTTGGGGAACAC16.25No Hit
ATCATTATCTTTTAAAAAATTGACACACAGTTTGCTACAATACCACCCTT16.25No Hit
GTTTCCCACTGTGTAAATTTGAACTCTATAGTGATGTGAGATAAGCCTGG16.25No Hit
CTTATATGAAGAAGCTAAATTCATTAAAGTGAAAGAAACACAAAGTAGAA16.25No Hit
GGCAGGATTTATGTGCAACTGATCCCCTCAGAATGAGTGCTGACCGTGCC16.25No Hit
GTGGCTATAGAGTTTCAGTCAGGCAAGATGGAAAATTCTAGAGTCCTGCT16.25No Hit
AAACAGAATGGTGCTGGCTAGCACTACGGCAAAGGCTATGGAACCTGTCT16.25No Hit
CTCTTTGCGTGCGATTGGACCAGGCGATCATGGAAAAGAACATAGTACTG16.25No Hit
TCCTTGACCCCATGGAACGTTATTTCTCTTTTGAGCTTCTTGTATAGTTT16.25No Hit
TGAATACACAGTTCACAGCAGTAGGTAAAGAGTTCAACCACCTGGAAAAA16.25No Hit
GTTCCCATCCTGTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCAGT16.25No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)