FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_E2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_E2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTT28.0No Hit
GGCACTCCTCGATTGCTTCATATAGCCCCCCAAGATCGAAGGTTCCAGGT14.0No Hit
CCCTTAGTCAGAGGTGACAAGATTGGTCTTGTCTTTAGCCATTCCATGAG14.0No Hit
AAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCC14.0No Hit
CTCGACATAGGATGAGACACAATAGTTCACATACCAAGTAAAAAATGCCT14.0No Hit
GCTCTTCTAGGTATTTATTTCTTCTCTCATCAAAAGCAGAAAGCACCATC14.0No Hit
GAGTAAAAGGGTTTTCATTCAAATACGGCAATGGTGTTTGGATAGGGAGA14.0No Hit
AGGAGAGAAGGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAA14.0No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG14.0No Hit
TCTGGTAGGCCTGCAAATTTTCAAGAAGGTCATCTTTCAGACCACCACTG14.0No Hit
ATCAAAGAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT14.0No Hit
CAAGGTAGTTTTTTACTCTAGCTCTATGTTGACAAAATGACCATCGTCAA14.0No Hit
ATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACT14.0No Hit
CCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACT14.0No Hit
GAAAAGATGTGAATGTGTGTCTTCTCAGATTTTATTTTGTTGGCTTTCTC14.0No Hit
GAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGGAATTTT14.0No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG14.0No Hit
TCAACAGACACTGTAGACACAGTACTAGAAAAGAATGTAACAGTAACACA14.0No Hit
TACAAACCCTGGCCATGCAGATCTCAGTGCCAAGGAGTCACAGGATGTGA14.0No Hit
CAACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAG14.0No Hit
AGGCAATGAAAGAATATGGGGAAGATCCGAAAATCGAAACTAACAAGTTT14.0No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC14.0No Hit
CCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCAC14.0No Hit
CCTGTTGATATTCTTCCCTCATGGACTCAGGCACTCCTTCCGTAGAAGGC14.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)