FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A9a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A9a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGAGAGAGGAACAGAGGGAAAGGGAGAAGGAGCCGCCACAGTGAGCA17.6923076923076925No Hit
GAGCAAAAGCAGGTCAAATATATTCAATATGTAGAGAATAAAAGAACTGA17.6923076923076925No Hit
CAATATATTGAGAACACAAGAGTCAGAATGTGAATGTGTAAATTGTTCTT17.6923076923076925No Hit
TCCTGTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAG17.6923076923076925No Hit
GTCAAAAATGAAGTTGGTGTACTCATCTGATTACTTTAATTGAATGGTAA17.6923076923076925No Hit
TTCCAATAGTTAGCCAATTGATGAAATCATGACAATCACTTGCTCAACAA17.6923076923076925No Hit
AAACGTAAGTTCTTTCTATCATCCCGTCAGGCACCCTAAAAGCCGAGATC17.6923076923076925No Hit
CATCTGTACCTACTTCGCGCTACCTGTCTTAAATGACCCTAGAGTAAATT17.6923076923076925No Hit
AATGATGACACTGAGCTCAATTGCTCTCGTAGCTCCTCATAATCGATGAA17.6923076923076925No Hit
TTTCAGATGAGGAAGCCTAGACCAGACACTGGGCTCTGAGTTTTTTTCTA17.6923076923076925No Hit
CAAAAACATATGCATCTGCATTCTGATAGAGACTTTGTTGGTCAGCACTA17.6923076923076925No Hit
CATTAAAATAAGTCAATGGTGTTTGTATATTGAGAACTAAAAGAATTATA17.6923076923076925No Hit
ACAGGAGAGAGGAACAGAGGGAAAGGGAGAAGGAGACTCCACAGTGAGCA17.6923076923076925No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)