FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGTAGAACAAGAGATAAGAGCTTTCTCTTTTCAGCTTATTTAATGATA13.8461538461538463No Hit
ATTTATAGGTTATCATTCGACCAATTAAAAAGACACTGTAGCAACAGTCA13.8461538461538463No Hit
ATATAATACTAAATTGAAAATATAAAGAAAATGAGAACGTACAGCATCAG13.8461538461538463No Hit
TCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACTAT13.8461538461538463No Hit
ATTTAATATGATGACTTAGAAAATTTTTGTTCCATTCTTCTAACTCAGGT13.8461538461538463No Hit
ACACAATGAAGACTATTTGTTAAATATAATACTAAAATGAAAATATAAAG13.8461538461538463No Hit
CGACAAAACAATCTCCTGGTACAGAAGATATTCGTCAATAATGTACATCT13.8461538461538463No Hit
TCTTGTATAGTTTAAATGCTCTATCCATGAAGTTCGGGTCCCCATTACAA13.8461538461538463No Hit
AAAAACTCAGAGGAATCAAAATAAAACAGAGAATAAATATATGCTGTAAA13.8461538461538463No Hit
GCACTTAGGGACAACCTGGAACCTGGACCATTCGATCTTGGGGGGCTATA13.8461538461538463No Hit
GCATGGAATATGATGCCGTTGCAACTACACATTCCTGGATTCCCAAGAGG13.8461538461538463No Hit
AATTAGTGCTGTGTCTTAACTTTCATTGTATATTCCTTTATAATTAGATC13.8461538461538463No Hit
GTCCCGTTTTAGTTTCATTACAAACTATAACTCCACTTTCACAACTAGGT13.8461538461538463No Hit
AGCATGCAGAGTATAAAGAACCAAGAAAGACATCATACGCGTAATGTTCT13.8461538461538463No Hit
ATATTACTTGAGTTTTTTTTTTTTTAAGATTCTATTTATTTGTCAGAGAG13.8461538461538463No Hit
CATGGGAGCAGTATGATGATACAAGTATGCCTCATTGGATAAAAGCCACT13.8461538461538463No Hit
ACAAAGTATATTAACTAGAGAATTGAGTGTAGCTGACTGCATCCTAGTTA13.8461538461538463No Hit
GAGAGCAAGAGCGCGAGCAAGCACAGCAGCAGGGGACATGGGAGCACCTG13.8461538461538463No Hit
GGTCATATTGCAGACCAGCACTGGAGCTAGGATGAGTCCCAATATGTATC13.8461538461538463No Hit
CTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGG13.8461538461538463No Hit
CATTTCTTCATTAGTACTCTCAATTTTTCTACAATGAACTTGATATTACT13.8461538461538463No Hit
ATATCATTGGGATCTTGCACCTGATATTGTGGATTACTGATCGTCTTTTT13.8461538461538463No Hit
CTCCAGGCCATAGCAATCTTCTCCAAATTCTACTGGTCATCAATGCCACC13.8461538461538463No Hit
GTCTCGTGACATTTCCTCGAGCGTCATCACAGAAAGGTACCGCCAAGTAG13.8461538461538463No Hit
TTCTTTGTCTTATTAGAGGAGTTAATAAGTTAAAGTCGCATTCCAAATGT13.8461538461538463No Hit
CTCTTAACTTTCATTGTTTATTCCTTAATAATTAGATCAAAATATATATC13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)