FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCACAAGGCATTTGCGGTGCTGCCTTCCTCTCATTTATTGCACGGGCT14.761904761904762No Hit
CCATTTACACATGCACATTCAGACTCTTGTGTTCTCAATATATTGTTTCT14.761904761904762No Hit
AAACAAGGAAGCAGAATTAAGATCAAAATAATGAATACATTTGACAAAGG14.761904761904762No Hit
GTCTCTATCTGCACAGACTACAGAATGTTTGCTGTCACCAATGCTTCCCT14.761904761904762No Hit
CAGTCTCTATCTGCACAGACTACAGAATGTTTGCTGTCACCAATGCTTCC14.761904761904762No Hit
GTAGAAACAAGGTCGTTTATAAACAATTCGACACTAATTCATGACCATCA14.761904761904762No Hit
GCTATATACAGTAAAGACAACAGTGTAAGAATAGGTTCAAAGTGGGATGT14.761904761904762No Hit
CAGAAAGCTATGGGTAATTAGTAAATTTATAGTCCGATTATTAAAAACCA14.761904761904762No Hit
CGCTCACTGGGCACGGTGAGCGTGAACACAAATCCTAAAATTCCCTTAGT14.761904761904762No Hit
CTATTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGA14.761904761904762No Hit
GGGATAACTGGCATGGCTCGAATCGACCGTGGGTGTCTTTCAACCAGAAT14.761904761904762No Hit
GTTAAATACATATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAA14.761904761904762No Hit
CAATGGACGACTACAAAAATCGGACGAGGGACTACACCTGTCTCTGAGAC14.761904761904762No Hit
GTCGAAATGAAAGCACCTAATAATAACAATGATGAATGCTCCAGTTATCC14.761904761904762No Hit
AAAAACACCATTTAAGTATTTGAATGACAAACCGTTTACGAAATTGTATC14.761904761904762No Hit
CAAAACTGCGTCACTAAATGTAAGAATAAAAACATCTGCAGAGGGACTAC14.761904761904762No Hit
ACATTAGATCTCACACTACATTTATTCACTAGATATTGAATATATTATAC14.761904761904762No Hit
GAATATGGGGAAGAACCGAAAATCGAAACAAACAAGATTCCTGCAATCTA14.761904761904762No Hit
TTCTGTAGTCTGTGCAGATAGAGACTGAGCACTGATTGCATGCTGGGAGC14.761904761904762No Hit
GATACCATCCAGTTCTATTTGTCCCCCTACGTTCACCGCAGACCCGGCGT14.761904761904762No Hit
ATTGAGCTCAGTGTCATCATTTTAACGGTTTGAGATATTCCCAAAAACAT14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)