FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A4a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A4a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACCGGGCCTCATGAAGTTGTAGATCCAGCTCCCACCCAGATAACACTG18.333333333333332No Hit
GATATGTGGCATCATTCAGGTTGGAATGCCAAATCATGATATGAGTAAGA18.333333333333332No Hit
GCTAGCACCTTCTTACAAGCCATTAGGTAATTGCGATTTATGCGTTTCTC18.333333333333332No Hit
GTATGTCATAGATCATCTGGTTCTTGTGGGGTGTGTGTGTCAGAATCACA18.333333333333332No Hit
GGCAATTGTATTTTCCGTACAGAACACAGATCTGGATGCGCTCATGTACG18.333333333333332No Hit
ATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCAAAAATGAGAAA18.333333333333332No Hit
CTAACAATAATGCACAGAAGAGATCACAATGAGTAAGGACATGCCATCAA18.333333333333332No Hit
TGGCATGCCACTATGCTGCATTTGAAGATTTAAGAGTATCAAGTTTAATA18.333333333333332No Hit
GCTAGAAACATAGTAAGAAGAGCAGCAGTGGCAGAAGCCCCATTAGCATC18.333333333333332No Hit
AATTTGTAGCAACCAGTCTAGCGGCCAATCAGATGCAATCTCATATACTC18.333333333333332No Hit
GAGCAATAGTTGGAGAAATTTCAACATTACCTTCTCTTCAAGGACATACT18.333333333333332No Hit
CTCCTCCAGTGTTCTCTGGGTGGGAGCTGGATCTACAACTTCATGAGGCC18.333333333333332No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)