FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACCGGGCCTCATGAAGTTGTAGATCCAGCTCCCACCCAGATAACACTG11.7857142857142856No Hit
GCTCCCTGCTGAGCAGAGAGCTCCATCTGGGGCACCAAGCCAAGACCCAG11.7857142857142856No Hit
CCTGAGAACTCCCTCACTATCAGGGGAGCAGCAGGGGGGAAACTGTCCCC11.7857142857142856No Hit
GTATGTCATAGATCATCTGGTTCTTGTGGGGTGTGTGTGTCAGAATCACA11.7857142857142856No Hit
ATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCAAAAATGAGAAA11.7857142857142856No Hit
CTACTAAGGGCGTTCACTGAGGAGGCAGCAATAGTTGGATAAATTAAACA11.7857142857142856No Hit
CTAACAGGCCAGATAGAGCAATTGCAACATAATAACCCGGAACCAACTGA11.7857142857142856No Hit
AATTTGTAGCAACCAGTCTAGCGGCCAATCAGATGCAATCTCATATACTC11.7857142857142856No Hit
TAACAATAGCAATGTAGTTAATCATAATGATCAAAATTGTAATCAATGAA11.7857142857142856No Hit
CTCTAATGCAAGGTTCAACACTTCCCAGAAGGTCTGGTGCCGCAGGTGCT11.7857142857142856No Hit
GGTTATCATGAGAACAATTCAACAGAAACTGTAGAAACAGTACTAGAAAA11.7857142857142856No Hit
AAAGGATATGCTGCTCCCGCTAGACCAGATTGTGTTCTCTTTGGGTCGCC11.7857142857142856No Hit
ACTTCAAGGAGTAGTTGTAAGGCTTCCAAAAATGATATTTGTTCGAAACT11.7857142857142856No Hit
GGACATACATACGGCATTGATCAATGAATCATTGTAATCCATTTATGAAT11.7857142857142856No Hit
CTAACAATAATGCACAGAAGAGATCACAATGAGTAAGGACATGCCATCAA11.7857142857142856No Hit
AGGGAGGTCATTCCAGGAGAGAGCAGGAGGCCTGACAGTTTGCGGGAGCC11.7857142857142856No Hit
TTCTCGATCCCTCACTTTGGGTCTTATTTCTATTTCCGGCTTGAACTTCT11.7857142857142856No Hit
GTCTCTGCTCAGGCGAACAATTTCACAAAGTGACTGTGAAGCATTTGAAT11.7857142857142856No Hit
ATTCATTAGAAACTTTACGTCCACTTGACTTAATACCTGAATAGCCTACA11.7857142857142856No Hit
ATCCCGACCAGTGAGTACCCTTCCCTTTCAAAGTCATGCCCACTTGCTAC11.7857142857142856No Hit
GTGCCCTTGCCAGTTGCATGGGCATCCTAAACCACAGGATCTGTACACTG11.7857142857142856No Hit
CCCTCTGAAGGTGTTTCCCATGTGATTCTGACACACACACCCCACAAGAA11.7857142857142856No Hit
CCCAAGAAGATCATCCCTTTGCAGCGGAGGATACAAATACAACAGGAGAT11.7857142857142856No Hit
CAGAATTTAATTTGCCTAACTCAATATTTCAAAAGTAAAATCCTCTATCT11.7857142857142856No Hit
ACTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGA11.7857142857142856No Hit
GTCAAGGGAGGAACCTGGTCGCAGGGGATGGGATCTGGGGACAGATTCCC11.7857142857142856No Hit
GAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGATCGCCTGGTCCAATC11.7857142857142856No Hit
TAGAATGAAACAAGTGTGGATGCACCAAAATACTGTGTTAGAGAGGCTAT11.7857142857142856No Hit
TACATATTCTACACTGTAGAGCCCCAGTAGAGCTCATCCAGAAACCTGTC11.7857142857142856No Hit
ATGCTGTATGTCATAGATCATCTGGTTCTTGTGGGGTGTGTGTGTCAGAA11.7857142857142856No Hit
GCTAGAAACATAGTAAGAAGAGCAGCAGTGGCAGAAGCCCCATTAGCATC11.7857142857142856No Hit
GTCTGTGAGGGCGAAGCAGTTAATGATGAATGTGTTCACAAGATGCAGAC11.7857142857142856No Hit
CTGGATCTACAACTTCATGAGGCCCGGTGCCACACAGTGAGTGACCTCCA11.7857142857142856No Hit
AATTAGCACATTAGCCGTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA11.7857142857142856No Hit
CTAGGGAAGCAGCACAGGCCACAAGAGATGCGAGCTGGCAGGCTGTTTCC11.7857142857142856No Hit
CTACAGCACGTGGGGACTCTGCCTGTGTGCCCCCACCAGCATTATCACCG11.7857142857142856No Hit
AGCAGGCTGAGGCATTGGGTGACCCGGTGGCTCATAGGGTGGGGGACCAA11.7857142857142856No Hit
GCTGTATCCTGTTAAATCCAGAGTTTGAAGCAATCTCAACAGCAATCTAA11.7857142857142856No Hit
GATATGTGGCATCATTCAGGTTGGAATGCCAAATCATGATATGAGTAAGA11.7857142857142856No Hit
GGCAATTGTATTTTCCGTACAGAACACAGATCTGGATGCGCTCATGTACG11.7857142857142856No Hit
GTGTTGGAGTAAGTTGAATTGTTCTATCAAGCACAGTTAGTCCACTTCCA11.7857142857142856No Hit
CTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTCTGTCTCTTAT11.7857142857142856No Hit
ATGAACAATTGAAGAGCCATCTGGGCCGTTGCAGGTCAATGGTCATTGTT11.7857142857142856No Hit
TGTCAAAGGAAGGCACGATCGCGTTAGAAGCCTTTTCGTCCGAGACCTCG11.7857142857142856No Hit
AACTTATACAATATACGGAATATTCACATTACTTAAGTCAGCTAAAAATG11.7857142857142856No Hit
ATGAGACACTAATTGATGGCCATAAGAATTAGTTTTTTCTCTTTCGGTCT11.7857142857142856No Hit
CAGTGTAACTGTTTACACCACAAAAGTATATGCTTCTCCAGATAGTCAAG11.7857142857142856No Hit
CTCCTCCAGTGTTCTCTGGGTGGGAGCTGGATCTACAACTTCATGAGGCC11.7857142857142856No Hit
GGATAGAACTTGATGAAATAGGAGAAGATGTTGCACACATAGAACATATC11.7857142857142856No Hit
GCTAGCACCTTCTTACAAGCCATTAGGTAATTGCGATTTATGCGTTTCTC11.7857142857142856No Hit
AATTAATGCCATCATGACAAGCACTTGCTGACCAAGCGACTGACTCAAAT11.7857142857142856No Hit
CTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACTA11.7857142857142856No Hit
TGGCATGCCACTATGCTGCATTTGAAGATTTAAGAGTATCAAGTTTAATA11.7857142857142856No Hit
GAGCAATAGTTGGAGAAATTTCAACATTACCTTCTCTTCAAGGACATACT11.7857142857142856No Hit
GGCAGAGTCCCCACGTGCTGTAGAGCAGGGCCAGCAGAACTGTACTCAGC11.7857142857142856No Hit
GCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTGAGGAAGGAG11.7857142857142856No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)