FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A3a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A3a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATATTCCTCAATCCTGTGGAAAGGCTCAATTTTGTGATGTTTACATAT18.333333333333332No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA18.333333333333332No Hit
CAAGTGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACTGTCTC18.333333333333332No Hit
GAGTGGTTGTATTAGCCATCTGTCTTTGATCACTATGCTGTGAAGAAGCA18.333333333333332No Hit
CTTTGTAATCATACAAATCAGGAAGAAATTTAGGCTTCTCTACCCCTGTT18.333333333333332No Hit
ATATACAACAGTAGGCGAAAAGTGAAACAATCATCTGCTGATTTAATACT18.333333333333332No Hit
GTAGTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTC18.333333333333332No Hit
ATTATATTCCTGGCTTTAAAGTTGAGAGAGTTGCCTGGGAATACTTTCGA18.333333333333332No Hit
GTGCATTTAAAATATGACTCGGAGTTTTGTATACACAACATTAATAATAA18.333333333333332No Hit
CGCAAGCGATTTGCAGACAATGGATTGGGTGATGACCCATTCCTTGATCG18.333333333333332No Hit
CTTCTCCACCTGCTGTGTCATCATGTATTCCATCACCACCAGCACCATGG18.333333333333332No Hit
ACATAGTACTGAAAGAGAACTTCAGTGTAATCTTTAACCGATTAGATACC18.333333333333332No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)