FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCCTGCATGGTGGGGGTGATACTGGGAAGGGAGCCACGTCAGATCCCC13.225806451612903No Hit
AAACAATGGTGTTTTTTATAATTAAATAAGCTGAAACTAGAAAGCTCTTA13.225806451612903No Hit
TTCTAGTACTGTGTCTACAGTGTCTGTTGAATTGTTCGCATGATAACCTA13.225806451612903No Hit
ACTATACTGTTAGATTGAATTTAAATTATTCAAAGATTTTCTAGCAATAA13.225806451612903No Hit
GAAATAAATACCAAGAAGAGCATCGCAGTGCTGTGATGATGCCTAAGAAA13.225806451612903No Hit
CGTTATTTCTCTTTTGAGCTTCTTGTATAGTTTAACTGCTCTATACATGT13.225806451612903No Hit
GAATAGTAAAAGCTGGTATTATGGGCCAAAGTCCTTGGTGGATGTCTCTT13.225806451612903No Hit
ATTTAATATTGTACAAAATGCCACTCTGTCTCCTACAGCAAGCTTTTTGC13.225806451612903No Hit
GTAGAAACAAGGTAGTTTTTTACGCTAGCTCAATGTAGACAACTGTCTCT13.225806451612903No Hit
GTACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGG13.225806451612903No Hit
GAAATATAACAAATAATCATAAAATTTTTATGTAACAAAAAAAGAGCCTT13.225806451612903No Hit
GTGGATTCCTGATAGTCTTTTTTTCAACGGTAGTTATCGTCGCTTTACAT13.225806451612903No Hit
GCACTGCAGCTAGTGAAGTACTCCCATTCTAGTCACACTTACTAGTAGTG13.225806451612903No Hit
CAACCTTAAAAAAGGAAAGCAAATCTTGAGGTATCACTGTCTCTTATACA13.225806451612903No Hit
AGCCAATGGAGAAAAAGGGTTTTCATTCAAAAACTGCAATCGTGATTGGA13.225806451612903No Hit
TTCCCTTATACTGGAGATCCTCCATACACTCATGGAACCAGTCTCATTTA13.225806451612903No Hit
TTATATACATCTTAACAATATTGTTCTTACAATCCAGTATAATGGATTTT13.225806451612903No Hit
GTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTCTATGCTGTAATT13.225806451612903No Hit
GAATAAAACTGTCAAAAAATAAAGAAAGTGACTTAGAGAAGGATCCATAA13.225806451612903No Hit
CTATGGAGAGAATAAAAGAACTGATAGATCTAATGTCTGTCTCTTATACA13.225806451612903No Hit
GTAGAAGAAACAGTCAATGTGTAAGAGGCAATGACATTTCAAAAAGATCG13.225806451612903No Hit
CACTGGGCACGGTGAGCGTGAACACAAATCCTAAAATTCCCTTAGTCAGA13.225806451612903No Hit
TCATAGTGATTAGGAAGTTAAGAATGTATTTCTTTCTAAGTATCATGAAT13.225806451612903No Hit
GAGGTTGCTAATCAGACTAGGCAGATGGTACATGCAATGAGAACTATTGG13.225806451612903No Hit
GAGCTAGACTCGGTTTGCAGTTCTATACTAAAACTCCTTTTCCTGTCTCT13.225806451612903No Hit
AGTGAACAGGCAGCGGAGGCCATGGAGGTTGCTAATCAGACTAGGCAGAT13.225806451612903No Hit
CTATTGAAGCACCGATTTGAGATAATTGAAGGAAGATACCGAATCATGGA13.225806451612903No Hit
GTCTAAACTAGATTTAGGAAGATATCATGAAGTCTATTGAAGAAAAGAAA13.225806451612903No Hit
GCTGAGACCTGACAGCAAGTTTCTCTTCTCTACTTCTTCCGCCCGCCTCT13.225806451612903No Hit
GGCAGGAAACAAGTACTCTGGACCAAAAATAAAACTTCTTTGAAGGAGAC13.225806451612903No Hit
CAGTTAAACTATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGTGGCC13.225806451612903No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)