FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A11.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A11.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTATGGAACAGATGGCTGGATCGAGTGAACAGGCAGCGGAGGCCATGG12.7027027027027026No Hit
ATTCTGGAATAGTAGTACCTAATTATCACAGATTTTGAGTTCAGTGCTCA12.7027027027027026No Hit
CAGGATAACAGGAGCATTCATAATATTGATAATTATGTGCATTCATTTAT12.7027027027027026No Hit
ATGTTGACAAAATGACCATCGTCAACATCCACAGCACTCTGCTGTTCCTG12.7027027027027026No Hit
TCAGCAATCTGTTCACAAGTGGCACACACTAGACCAAAAGCAGCTTCTGT12.7027027027027026No Hit
AAGCAGGAGTTTAAAATGAATCCAAACCAAAAGATAATAACCATTGGTTC12.7027027027027026No Hit
TCCTTGGCCACATTGCAAGTTATTTCTATGTTGAGCTTCTGGTATAGTTT12.7027027027027026No Hit
CTTAGGGACAACCTGGAACCTGGAACCTTCGATCTTGGGGGGCTATATGA12.7027027027027026No Hit
CACATGCACTGATGAAGTAGTCGCCAAGCTTATAATTCCTATAGAAACGT12.7027027027027026No Hit
GCAATGAAAGAATATGGGGAAGATCAGAAAATCGAAACTAACAAGTTTGC12.7027027027027026No Hit
GTATGGATAGCAAATAGTAGCATTGCCACTACTACTTCAGTGCATGTGAG12.7027027027027026No Hit
TTAGTATCAAGTTATCTAATCGGTTAAAGAGTACACTGAAGTTCTATTTC12.7027027027027026No Hit
GCGCAAACGAAGTGTAAAACAAAATAAACAAAAAGTCATGCAATAATATT12.7027027027027026No Hit
GTATTTATCGTCGCTTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAA12.7027027027027026No Hit
ATGAAGTGGGGGCAAGAATACTGAAATCAGAGTCACAGCTGGCAATAACA12.7027027027027026No Hit
GGCCAAACTGGCAAATGTTGTGAGAAAGATGATGACTAATTCACAAGACA12.7027027027027026No Hit
ATAAACACCAGCCTCCCATTTCAGAATATACATCCGATCACAATTGGAAA12.7027027027027026No Hit
GTAATCCACAATATCAGGTGCAAGATACCAATGATATTTGATGCAATGAC12.7027027027027026No Hit
AATAATAAACTGGGAAATTTTGAAAATTAAATTGTCACAAGATAAAAAAA12.7027027027027026No Hit
CTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGATTGGACCA12.7027027027027026No Hit
AATTTGAATGGGTCTATCCCGACCAGTGAGTACCCTTCCCTTTCAAAGTC12.7027027027027026No Hit
GGAAACACCAAGCAATCTATTCGAGAAATTTTTCCCAAGCAGATCATATA12.7027027027027026No Hit
CATTATGTATAGGTTATCATGCGAACAATTCAACAGACACTGTAGACACA12.7027027027027026No Hit
GTTCTGATATATACATTTGCAACCGCAAATGAAGACAAATTATTTATAGG12.7027027027027026No Hit
ATAAATAAGACATGGACCTATGAATTCACAAGCTATTTTTATCGCTATGG12.7027027027027026No Hit
TCTTGGTCATGTTGTCTCTTACTCTCCTTTTTCTTTGAAAGTGGGTTGTT12.7027027027027026No Hit
GAATATGGGGAAGATCCGAAAATCGAAACTAACAAGTTTGCTGCAATGTA12.7027027027027026No Hit
GAATGGTGCTGGCTAGCACTACGGCAAAGCCTAAGCATCAGATGCCTCCA12.7027027027027026No Hit
GGTTTTCACAAAGTCACAGAACAATGAGAAGCAATTTTATAGAATCATCC12.7027027027027026No Hit
GTTAAAGTACAACGGCATAATAACAGACACAATCAAGAGTTGGAGCAACA12.7027027027027026No Hit
ATGGAAAGAAATGCTGGATCTGGTATTATCATTTCAGATACACCAGTCCA12.7027027027027026No Hit
ACATTTGCTTATCATTGGGATCAGCTGAAAGTCATCCATGGCTGCACAGC12.7027027027027026No Hit
GAGCTAGGATGAGTCCCAATAGTTCTCATTGCATGCTGTCTCTTATACAC12.7027027027027026No Hit
GAGCAAAAGCAGGTCAATTATATTCAATATGGAGAGAATCTGTGTCTTAT12.7027027027027026No Hit
CATTCATATCATGCTCCCCCTTGGAATGCAGAACCTTCTTCTTGACTCAA12.7027027027027026No Hit
CTTGTTAGGTAATGAGTACAGCTGATCAGTGTCATCCACCTTTTACTCTA12.7027027027027026No Hit
CATAAATGATGTGGGAGATCAATGGCCGTGAGAAAGTGATAGAGAACACA12.7027027027027026No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)