FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n01_CIVIR_Ferret_Flu_R1_A10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTTTAATCCATTTGCTCCAAAAGACGATACTGGAACACAAATGCCTG15.555555555555555No Hit
AGTTTAAAAAAAGTATAAGAAACATCTAATCTGAATCCCAGTTGTTGATA15.555555555555555No Hit
AGGCAGATGGTACATGCAATGAGAACTATTGGGACTCATCCTAGCTCCAG15.555555555555555No Hit
GAAAAGAACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTACCCGATT15.555555555555555No Hit
CTCAATTAGTGACATCGAAGACATGGCTTATCAAGGCACCAAACGATAAT15.555555555555555No Hit
ATGACGAGAGGATCACTTGAATCGCTGAAGCTGCACTCACATTCGCTTCT15.555555555555555No Hit
CTGTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCACTTGAATAGCT15.555555555555555No Hit
CAATACTAGTAGTTCTGCTATATACATTTGCAACCGCAAATGCAGACACA15.555555555555555No Hit
GTTTGAGATATTCCCCAAGACAAGTTCATGGCCCAATCATGACTCGAACA15.555555555555555No Hit
ATGTTACATTTACCCAAATGCAATGGGGCTACCCCTCTTAGTTTGCATAG15.555555555555555No Hit
AAAGAGAAATAACGTTCCATGTGGCCAAGGAGGTGTCACTAAGCTATTCA15.555555555555555No Hit
GTGTCCATCAATCGGGTTGAGCTGGGGTGCACCAGTCTCTGTGTTTGTCG15.555555555555555No Hit
TCTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTTACACTGAGGAG15.555555555555555No Hit
ACTAAGGGCTGTCACTGAGGAGGGAGCAATAGTTGTAGAAATTTCACCAT15.555555555555555No Hit
CTTATGAGGATGTAAAAAATGCAGTTTGTGTCCTCATCTGAGGACTTGAA15.555555555555555No Hit
GTAGAAACAAGGGTTTTTTTTATAATTAAATAAGATGAAAATAGAAAGCT15.555555555555555No Hit
ATATGGTTTTGTCGTGTTATCAGTGTCACTGTGGGTAGGTCTTGGCCACA15.555555555555555No Hit
GCTATATACATTTGCAACCGCAAATGCAGACACATTATGTAAAGGTTATC15.555555555555555No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)