H7GKMBGXC_n02_MT_30976.TR2_3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7GKMBGXC_n02_MT_30976.TR2_3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	29629900
Sequences flagged as poor quality	0
Sequence length	151
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGTCT	48243	0.16281863927991658	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	47862	0.1615327760134189	No Hit
CGAACGCCGGGTTAAGGCGCCCGATGCCGACGCTCATCAGACCCCAGAAA	45745	0.15438796620980832	No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT	38191	0.12889344884727927	No Hit
GGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGC	36049	0.12166426481358358	No Hit
AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAG	33847	0.11423258262768352	No Hit
GCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTT	33710	0.1137702118468169	No Hit
GTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGT	33585	0.11334834069639113	No Hit
CTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAAT	33518	0.11312221775976294	No Hit
TGGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTCAGACATTTGGTGT	31665	0.1068683998258516	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTGTAT	7205	52.33405	145
CGTGTAT	7635	48.24693	145
AGGATAT	6915	48.237038	145
TCGTGTT	11870	44.350746	145
GCTCAGA	11565	35.35561	5
TAGCATA	11305	34.050472	8
GCCAGTA	11615	32.34389	3
CGCTCAG	11165	32.340504	4
GTAGCAT	11985	31.876314	7
CTCGGCT	11975	31.469835	1
CTTGTTA	6305	31.439833	1
AGTCTAA	17750	30.235357	3
GTTACGA	7060	29.474968	4
TGCCAGT	12690	29.446085	2
GAGTCTA	18430	28.975733	2
TCTAACA	19050	28.542442	5
CAATATA	2925	28.013512	145
AACGTAT	17490	27.521654	6
CCATTGT	12915	27.062483	145
GTCTAAC	20005	26.89314	4