H7GKMBGXC_n02_MT_30976.TR2_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7GKMBGXC_n02_MT_30976.TR2_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	29468958
Sequences flagged as poor quality	0
Sequence length	151
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGTCT	48161	0.16342959937708013	No Hit
CGAACGCCGGGTTAAGGCGCCCGATGCCGACGCTCATCAGACCCCAGAAA	45674	0.1549902103766275	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	43064	0.14613343301788953	No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT	38128	0.12938360426588547	No Hit
GGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGC	35989	0.1221251189132646	No Hit
AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAG	33790	0.11466302948343135	No Hit
GCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTT	33678	0.11428296853930159	No Hit
GTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGT	33538	0.11380789235913939	No Hit
CTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAAT	33469	0.11357374767034518	No Hit
TGGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTCAGACATTTGGTGT	31615	0.10728238168448304	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTGTAT	7255	49.172676	145
CGTGTAT	7620	47.29307	145
AGGATAT	6875	46.617146	145
TCGTGTT	12080	43.03763	145
GCTCAGA	11690	34.232403	5
TAGCATA	11510	34.199665	8
GCCAGTA	11510	33.5781	3
CTCGGCT	11990	32.33522	1
CGCTCAG	10935	32.15602	4
CCAAATT	4265	31.792063	145
AGTCTAA	18145	31.769794	3
GTAGCAT	12390	31.419472	7
GAGTCTA	18665	30.859467	2
GTTACGA	6740	30.656626	4
TGCCAGT	12615	30.362854	2
TCTAACA	19780	30.01722	5
CTTGTTA	6140	29.916164	1
GTCTAAC	20590	28.274738	4
CCTGCCA	12135	28.119776	1
TACTTCC	14990	26.744614	5