H7GKMBGXC_n02_MT_30844.TR4_3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7GKMBGXC_n02_MT_30844.TR4_3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25325628
Sequences flagged as poor quality	0
Sequence length	151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	121687	0.4804895657473923	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	37294	0.14725794756205057	No Hit
CCTCGATCGATTAGTATCTGTCAGCTCCATGTGTCGCCACACTTCCACCT	30952	0.12221612036629458	No Hit
GGAATATTAACCTGTTTCCCATCGACTACGCCTTTCGGCCTCGCCTTAGG	30212	0.11929417900318207	No Hit
GCCTAACTGCTTGGACGCGGATATCCAATACCGCGCTTACCCTATCCTCC	29602	0.11688555166331907	No Hit
CTGGAAGCAGGGCATTTGTTGCTTCAGCACCGTAGTGCCTCGTCATCACG	29362	0.11593789500501232	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCGATT	8320	71.622734	6
GATCGAT	8415	70.905205	5
TCGATTA	8495	70.31754	7
CGATTAG	8605	69.587555	8
AGATTAT	6550	61.663326	145
TCGATCG	9665	61.60015	3
CGATCGA	10000	59.671562	4
AGTGTAT	3950	58.01002	145
TGTTAAA	6370	53.84368	145
GCGACTA	4400	52.269543	2
ATTAGTT	4580	51.61372	145
TGTTAAT	6090	50.246773	145
GATCCAA	9060	48.492752	5
GGGAAAA	13060	47.58287	145
CCTAACT	10635	43.182552	2
GTAGATA	5410	42.756924	145
ATCCAAC	10905	42.080456	6
GATCCAG	16620	41.39688	5
TTGAACG	6895	39.952976	7
ATCCAGC	17315	39.648785	6