H7GKMBGXC_n01_MT_30844.TR4_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7GKMBGXC_n01_MT_30844.TR4_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25181380
Sequences flagged as poor quality	0
Sequence length	151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	86140	0.3420781545729424	No Hit
GGAATATTAACCTGTTTCCCATCGACTACGCCTTTCGGCCTCGCCTTAGG	36066	0.14322487488771465	No Hit
CCTCGATCGATTAGTATCTGTCAGCTCCATGTGTCGCCACACTTCCACCT	35151	0.139591237652583	No Hit
CTGGAAGCAGGGCATTTGTTGCTTCAGCACCGTAGTGCCTCGTCATCACG	34712	0.1378478860173668	No Hit
GCCTAACTGCTTGGACGCGGATATCCAATACCGCGCTTACCCTATCCTCC	33837	0.1343730963116398	No Hit
CAGCTATCTCCCGGTTTGATTGGCCTTTCACCCCCAGCCACAAGTCATCC	27043	0.10739284344225773	No Hit
CCTGGAAGCAGGGCATTTGTTGCTTCAGCACCGTAGTGCCTCGTCATCAC	26236	0.10418809453651866	No Hit
GTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGC	26066	0.10351299253654883	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGAT	8380	78.02309	5
ATCGATT	8435	77.34247	6
TCGATTA	8545	76.172035	7
CGATTAG	8595	75.05427	8
TCGATCG	10130	64.47272	3
CGATCGA	10285	63.571556	4
GCGACTA	4165	53.95197	2
CCTAACT	10840	50.28624	2
GATCCAA	8270	48.1202	5
GATCCAG	15820	43.070705	5
TTGAACG	6755	42.81331	7
ATCCAAC	9805	41.69578	6
ATCCAGC	16510	41.270657	6
TAACTGC	13465	41.075115	4
ATTCGCC	2865	39.220135	145
GGAAGCA	14480	39.197086	3
TCATTAG	11170	39.19623	3
GCCTAAC	14135	39.12978	1
GATTGAA	7515	39.06489	5
TCAGATT	7340	37.82364	2