H7G5CBGXC_n01_DJ43.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7G5CBGXC_n01_DJ43.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10755483
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGCGTTAAATTCTAGGTGGAAGTCGTGCATTTATTGAAGGCCGTTTATG	4129104	38.39068873057584	No Hit
TCATGCATCCAAATACAATGATCCAGGGAAAAAGACATTGAAGGGATGAA	1419486	13.197789443765565	No Hit
GGCGTTAAATTCTAGGTGGAAGTCGTGCATTTATTGAAGGCCGTTTATGG	283537	2.636208899219124	No Hit
CATGCATCCAAATACAATGATCCAGGGAAAAAGACATTGAAGGGATGAAT	97430	0.905863548852246	No Hit
GGGCGTTAAATTCTAGGTGGAAGTCGTGCATTTATTGAAGGCCGTTTATG	41473	0.38559867557784244	No Hit
GCGTTAAATTCTAGGTGGAAGTCGTGCATTTATTGAAGGCCGTTTATGGT	18305	0.17019226379698615	No Hit
TGGCGTTAAATTCTAGGTGGAAGATCATTGTATTTGGATGCATGAAGATC	17296	0.16081100216512823	No Hit
TCATGCATCCAAATACAATGATCGGGCTTTATTTAAAAAAACAAAATGGG	16993	0.15799383440055645	No Hit
TGGCGTTAAATTCTAGGTGGAAGAGATCATTGTATTTGGATGCATGAAGA	15146	0.1408211978950643	No Hit
ATGCATCCAAATACAATGATCCAGGGAAAAAGACATTGAAGGGATGAATC	14111	0.13119819909528935	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCATGCA	541950	69.53145	1
TGGCGTT	435685	69.52109	1
CATGCAT	580295	65.487274	2
GGCGTTA	471500	65.05842	2
AGGCCGT	461430	65.02126	39
GGCCGTT	461360	65.012924	40
AAGGCCG	461765	65.00593	38
ATGCATC	584695	64.98428	3
CGACTTA	457970	64.98137	64
GAAGGCC	461860	64.9774	37
GGTCGAC	458000	64.97328	61
GACTTAT	458705	64.94897	65
TGAAGGC	462480	64.94857	36
GGTCTCG	461100	64.941345	50
GTCTCGT	460910	64.9347	51
CCGTTTA	461980	64.93401	42
TGGTCGA	458580	64.928505	60
GTCGACT	458285	64.92525	62
TGGTCTC	461445	64.90644	49
GCCGTTT	462240	64.905815	41