H7G5CBGXC_n01_DJ42.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7G5CBGXC_n01_DJ42.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11137621
Sequences flagged as poor quality	0
Sequence length	76
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCAGATTGCCTTTTATTGCTAAACTACTAGTACATAGGCAAACTGCCGGG	1028759	9.236793027882705	No Hit
GAGCCAACTTCAAGAATAGGATCACCGACCCCATTTCTCATTAGAGCCAA	486091	4.364406007351121	No Hit
CCAGATTGCCTTTTATTGCTAAACTACTAGTACATCTATCAATCTATTTA	128964	1.15791334612661	No Hit
GAGCCAACTTCAAGAATAGGATCTCTTGACCAATTACGAGAATATTGGAA	70795	0.6356384366104755	No Hit
CAGATTGCCTTTTATTGCTAAACTACTAGTACATAGGCAAACTGCCGGGC	33924	0.30458928347445113	No Hit
AGCCAACTTCAAGAATAGGATCACCGACCCCATTTCTCATTAGAGCCAAA	14493	0.13012653240759403	No Hit
AGATTGCCTTTTATTGCTAAACTACTAGTACATAGGCAAACTGCCGGGCA	13289	0.11931632437483732	No Hit
CCAGATTGCCTTTTATTGCTAAACTACTAGTACAAGAAAACGCTGTGAGC	11917	0.10699771522123082	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCAGATT	625195	69.606865	1
AGCCAAC	437945	68.327065	2
GTACAGC	3475	67.68237	30
GCCAACT	445710	67.63898	3
GTACGCT	1595	67.58513	30
GAATAGG	446935	67.49852	14
ATAGGAT	446085	67.49079	16
TAGGATC	446470	67.40407	17
GTACGCA	2140	67.382095	30
AGAATAG	448980	67.34076	13
CAGATTG	647440	67.29947	2
AATAGGA	447960	67.28704	15
GTACAGA	7585	67.184166	30
CCAACTT	448620	67.16512	4
GTACCGT	6595	67.13312	30
AGTACAG	23475	67.06267	29
GTACGGC	820	67.01112	30
AGTACGC	5250	66.99983	29
GTACTAA	11435	66.99937	30
GTACACG	4310	66.99429	30