H7G5CBGXC_n01_DJ38.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7G5CBGXC_n01_DJ38.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12292209
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCAGATTGCCTTTTATTGCTAAACTACTAGTACATAGGCAAACTGCCGGG	1038831	8.451133559476576	No Hit
GAGCCAACTTCAAGAATAGGATCACCGACCCCATTTCTCATTAGAGCCAA	527747	4.29334548411925	No Hit
CCAGATTGCCTTTTATTGCTAAACTACTAGTACATCTATCAATCTATTTA	257306	2.093244590943743	No Hit
GAGCCAACTTCAAGAATAGGATCTCTTGACCAATTACGAGAATATTGGAA	156077	1.269722960291352	No Hit
CAGATTGCCTTTTATTGCTAAACTACTAGTACATAGGCAAACTGCCGGGC	42484	0.34561729303496225	No Hit
CCAGATTGCCTTTTATTGCTAAACTACTAGTACAAGAAAACGCTGTGAGC	33551	0.27294524523623054	No Hit
GAGCCAACTTCAAGAATAGGATCATGTTTCGAGGTGGATTGCAGTAGAGT	17265	0.14045481979683228	No Hit
AGCCAACTTCAAGAATAGGATCACCGACCCCATTTCTCATTAGAGCCAAA	15477	0.12590902090909778	No Hit
AGATTGCCTTTTATTGCTAAACTACTAGTACATAGGCAAACTGCCGGGCA	12624	0.1026991975160852	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCAGATT	653405	69.629036	1
AGCCAAC	515260	68.51435	2
GCCAACT	523055	67.914185	3
GAATAGG	525045	67.7976	14
TAGGATC	524030	67.77969	17
ATAGGAT	524630	67.76756	16
AGAATAG	526495	67.665	13
AATAGGA	526275	67.60749	15
CCAACTT	525435	67.58924	4
CAACTTC	527905	67.304756	5
AGGATCT	129195	67.242615	18
AAGAATA	530270	67.227905	12
AACTTCA	528980	67.21694	6
CAAGAAT	531305	67.05905	11
CTTCAAG	530695	67.04693	8
ACTTCAA	530670	67.0236	7
AGGATCG	75705	66.76884	18
TCAAGAA	533870	66.72309	10
CAGATTG	682535	66.718544	2
AGGATCA	230930	66.7131	18