H7G5CBGXC_n01_DJ32.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7G5CBGXC_n01_DJ32.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11598166
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGCGTTAAATTCTAGGTGGAAGTCGTGCATTTATTGAAGGCCGTTTATG	5173486	44.606069614799445	No Hit
TCATGCATCCAAATACAATGATCCAGGGAAAAAGACATTGAAGGGATGAA	2636564	22.732594101515705	No Hit
GGCGTTAAATTCTAGGTGGAAGTCGTGCATTTATTGAAGGCCGTTTATGG	171145	1.4756212318395856	No Hit
CATGCATCCAAATACAATGATCCAGGGAAAAAGACATTGAAGGGATGAAT	86780	0.7482217447137762	No Hit
TCATGCATCCAAATACAATGATCGGGCTTTATTTAAAAAAACAAAATGGG	75616	0.6519651469033984	No Hit
GGGCGTTAAATTCTAGGTGGAAGTCGTGCATTTATTGAAGGCCGTTTATG	73471	0.6334708435799247	No Hit
TCATGCATCCAAATACAATGATCGGACATGTCTCTGCGAGTATCAAATAC	51905	0.4475276522167384	No Hit
TCATGCATCCAAATACAATGATCATTCGATGGTTGGCATCCTAAAAATTT	26897	0.23190735500767967	No Hit
ATGCATCCAAATACAATGATCCAGGGAAAAAGACATTGAAGGGATGAATC	19369	0.16700054129247674	No Hit
GCGTTAAATTCTAGGTGGAAGTCGTGCATTTATTGAAGGCCGTTTATGGT	15822	0.1364181198993013	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	13385	0.11540617714904235	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCGTT	534590	69.9103	1
TCATGCA	545635	69.83724	1
GGCGTTA	561865	67.73699	2
CATGCAT	569105	67.63849	2
GCGTTAA	564125	67.51526	3
CTAGGTG	565140	67.45441	13
CGTTAAA	564785	67.44318	4
TAGGTGG	565305	67.434715	14
TCTAGGT	565605	67.42217	12
AGGCCGT	560285	67.41677	39
TTCTAGG	565675	67.41405	11
AAGGCCG	560870	67.41197	38
GTCGTGC	561670	67.40723	23
AGTCGTG	562025	67.40637	22
GGCCGTT	560245	67.40472	40
GAAGGCC	560780	67.40469	37
CGTGCAT	561355	67.40237	25
GGAAGTC	563785	67.401726	19
GGTCGAC	555890	67.39766	61
ATTCTAG	565740	67.397644	10