H5YFHBGXF_n01_QG706.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	H5YFHBGXF_n01_QG706.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	37819636
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	5165	0.0	14.500537	47
TATGCCG	5080	0.0	14.05427	48
CGTATGC	5225	0.0	13.597229	46
ATGCCGT	7550	0.0	9.688156	49
TCGTATG	6720	0.0	9.634797	45
CGTATCT	10095	0.0	8.667316	39
CCGTATC	14730	0.0	7.5557017	38
TCCGTAT	16270	0.0	7.077174	37
GTATCTC	12910	0.0	6.723153	40
CTCGTAT	11020	0.0	6.4469447	44
TGCCGTC	10910	0.0	6.3195167	50
TTCCGTA	20300	0.0	6.292881	36
CAGTCAC	37870	0.0	5.537182	70
GTCACAG	31590	0.0	5.4743752	70
GTATCGC	3955	0.0	5.309484	40
GTTCCGT	25275	0.0	5.289633	35
TCTCGTA	15900	0.0	5.0845714	43