H5YFHBGXF_n01_QG1118.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	H5YFHBGXF_n01_QG1118.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	40768614
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	5885	0.0	14.629577	46
GTATGCC	5910	0.0	14.626929	47
TATGCCG	5980	0.0	14.572761	48
TCGTATG	7875	0.0	11.243799	45
ATGCCGT	9080	0.0	9.404746	49
CTCGTAT	11435	0.0	7.743325	44
TGCCGTC	12135	0.0	7.0659575	50
AGTCACG	29235	0.0	6.7535076	70
GCCGTCT	12635	0.0	6.453979	51
ACGAGTG	23070	0.0	6.1758995	70
CACGAGT	23635	0.0	6.0873895	69
CTGCTTG	12565	0.0	5.76616	59
GTGGATA	17575	0.0	5.7352242	36
CAGTCAC	35670	0.0	5.5056	69
GTCACGA	29295	0.0	5.305598	69
TCTCGTA	17075	0.0	5.247156	43
TCACGAG	29165	0.0	5.2453303	70
GGATATC	18070	0.0	5.0938926	38