H5WYNBGXC_n02_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H5WYNBGXC_n02_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	33324537
Sequences flagged as poor quality	0
Sequence length	49
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	4501550	13.508214682772637	No Hit
GCATAGCTCTTAAACCGGTGTAGATCAGGCGGCCCCCCCATATAAGAAA	63411	0.19028321383729951	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT	53383	0.16019127287499899	No Hit
GCATAGCTCTTAAACCGTAGCTGAGAGTTGGTGCTCCCCATATAAGAAA	44017	0.1320858561365759	No Hit
GCATAGCTCTTAAACTTGCGACGCTTAGCCTCCGTCCCCATATAAGAAA	41860	0.12561314805363988	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCATAGC	75935	42.617245	1
ATAGCTC	77560	42.37364	3
CATAGCT	76750	42.34484	2
TTGTCCG	61585	42.142635	12
GTCCGAC	60305	42.101643	14
TGTCCGA	60395	42.070114	13
TAGCTCT	77590	42.00066	4
TCCGACA	60970	41.825905	15
CGACAAT	62360	41.81343	17
CCGACAA	62825	41.767536	16
GTTGTCC	62660	41.36299	11
AACCGGT	15260	41.315666	13
CTAACGG	8035	41.313408	6
TCTAACG	8430	41.08592	5
CAATACG	22180	41.06382	20
GACAATA	65285	40.881092	18
TAACGGC	8105	40.68877	7
TAAACCG	25110	40.629745	11
ACCGGTG	15505	40.358604	14
CGGTGTA	15485	40.035614	16