Basic Statistics
Measure | Value |
---|---|
Filename | H5WYNBGXC_n02_HTO_BRD4_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8893576 |
Sequences flagged as poor quality | 0 |
Sequence length | 49 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 56662 | 0.637111551079116 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGCTTAC | 281430 | 0.0 | 42.80366 | 1 |
ACTGTCT | 180875 | 0.0 | 42.80004 | 1 |
TTACTAT | 283380 | 0.0 | 42.74212 | 4 |
TACTATC | 283195 | 0.0 | 42.740116 | 5 |
GTCTAAC | 181025 | 0.0 | 42.733707 | 4 |
CGTATTC | 113515 | 0.0 | 42.732944 | 7 |
CTTACTA | 283730 | 0.0 | 42.726723 | 3 |
TCTAACG | 181010 | 0.0 | 42.701626 | 5 |
TATCCCC | 282195 | 0.0 | 42.691673 | 8 |
GGCTGAG | 243835 | 0.0 | 42.69091 | 3 |
GTATTCC | 113635 | 0.0 | 42.686165 | 8 |
CTATCCC | 282450 | 0.0 | 42.672684 | 7 |
CTAACGG | 180490 | 0.0 | 42.669796 | 6 |
TGTCTAA | 181380 | 0.0 | 42.651024 | 3 |
TGAGCTA | 244490 | 0.0 | 42.64537 | 6 |
ATCCCCC | 280665 | 0.0 | 42.64418 | 9 |
ACTATCC | 283560 | 0.0 | 42.644157 | 6 |
ACGTATT | 114170 | 0.0 | 42.643845 | 6 |
GCTGAGC | 243965 | 0.0 | 42.633713 | 4 |
CTGAGCT | 244760 | 0.0 | 42.6036 | 5 |