Basic Statistics
Measure | Value |
---|---|
Filename | H5WYNBGXC_n02_HTO_BRD4_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11897623 |
Sequences flagged as poor quality | 0 |
Sequence length | 49 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 58426 | 0.49107288069221894 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTGTCTA | 276960 | 0.0 | 42.875835 | 2 |
AGCTTAC | 434710 | 0.0 | 42.860004 | 1 |
CTTACTA | 437345 | 0.0 | 42.84634 | 3 |
TTACTAT | 437155 | 0.0 | 42.83675 | 4 |
GCTTACT | 434690 | 0.0 | 42.818157 | 2 |
ACTGTCT | 277370 | 0.0 | 42.79458 | 1 |
TGTCTAA | 277220 | 0.0 | 42.791096 | 3 |
TACTATC | 437260 | 0.0 | 42.7806 | 5 |
GTCTAAC | 277255 | 0.0 | 42.77698 | 4 |
CTAACGG | 276340 | 0.0 | 42.750755 | 6 |
GAGGCTG | 283950 | 0.0 | 42.74518 | 1 |
TCTAACG | 277135 | 0.0 | 42.73923 | 5 |
TATCCCC | 435580 | 0.0 | 42.69912 | 8 |
ACTATCC | 437450 | 0.0 | 42.69205 | 6 |
CTATCCC | 436005 | 0.0 | 42.688072 | 7 |
TAACGGC | 276395 | 0.0 | 42.684685 | 7 |
CGTATTC | 109785 | 0.0 | 42.674633 | 7 |
ATCCCCC | 433155 | 0.0 | 42.661194 | 9 |
GGCTGAG | 283750 | 0.0 | 42.661026 | 3 |
TGAGCTA | 284170 | 0.0 | 42.647907 | 6 |