Basic Statistics
Measure | Value |
---|---|
Filename | H5WYNBGXC_n02_BLG_BRD4_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29985224 |
Sequences flagged as poor quality | 0 |
Sequence length | 49 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 546109 | 1.821260364771662 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTGTCCG | 1926305 | 0.0 | 42.525303 | 12 |
TGTCCGA | 1931200 | 0.0 | 42.500317 | 13 |
GTCCGAC | 1933060 | 0.0 | 42.480064 | 14 |
TCCGACA | 1940520 | 0.0 | 42.466785 | 15 |
GTCTTTG | 611825 | 0.0 | 42.455875 | 11 |
CCGACAA | 1944900 | 0.0 | 42.427025 | 16 |
AGTCTTT | 194660 | 0.0 | 42.42286 | 10 |
CGACAAT | 1945570 | 0.0 | 42.37571 | 17 |
GGTCTTT | 214880 | 0.0 | 42.360252 | 10 |
GACAATA | 1952420 | 0.0 | 42.3553 | 18 |
TTTGTCA | 612820 | 0.0 | 42.330544 | 14 |
TCTTTGT | 613340 | 0.0 | 42.323303 | 12 |
AACGCTT | 98695 | 0.0 | 42.317936 | 13 |
GTTGTCC | 1936020 | 0.0 | 42.303955 | 11 |
ACAATAC | 1954975 | 0.0 | 42.30213 | 19 |
TGTTGTC | 553250 | 0.0 | 42.262856 | 10 |
TCAACGC | 99130 | 0.0 | 42.24215 | 11 |
AGTTGTC | 479025 | 0.0 | 42.239944 | 10 |
CAATACT | 490070 | 0.0 | 42.230442 | 20 |
TCCTACC | 138030 | 0.0 | 42.226257 | 13 |