Basic Statistics
Measure | Value |
---|---|
Filename | H5WYNBGXC_n02_BLG_BRD4_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29471589 |
Sequences flagged as poor quality | 0 |
Sequence length | 49 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 103510 | 0.3512196101811816 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTGTCCG | 1619095 | 0.0 | 42.518875 | 12 |
TGTCCGA | 1622555 | 0.0 | 42.49501 | 13 |
GTCCGAC | 1624220 | 0.0 | 42.47299 | 14 |
TCAACGC | 182445 | 0.0 | 42.470367 | 11 |
TCCGACA | 1629515 | 0.0 | 42.46582 | 15 |
AGTCTTT | 214245 | 0.0 | 42.462162 | 10 |
GTCTTTG | 672055 | 0.0 | 42.460545 | 11 |
AACGCTT | 182070 | 0.0 | 42.45329 | 13 |
CAACGCT | 182495 | 0.0 | 42.440918 | 12 |
TCCTACC | 278940 | 0.0 | 42.43859 | 13 |
TGTCCTA | 280835 | 0.0 | 42.43379 | 11 |
GTCCTAC | 280855 | 0.0 | 42.42756 | 12 |
CCGACAA | 1632605 | 0.0 | 42.421494 | 16 |
CGACAAT | 1633760 | 0.0 | 42.362083 | 17 |
GGTCTTT | 235605 | 0.0 | 42.35415 | 10 |
TCTTTGT | 673645 | 0.0 | 42.336887 | 12 |
GACAATA | 1639875 | 0.0 | 42.33442 | 18 |
CTGTCCT | 72695 | 0.0 | 42.333645 | 10 |
TTTGTCA | 673680 | 0.0 | 42.317425 | 14 |
CCCAACT | 278695 | 0.0 | 42.291042 | 18 |