H5TH7BCX2_l02n02_gal-ssb_gal_doxrap-3.352000000b0ea4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H5TH7BCX2_l02n02_gal-ssb_gal_doxrap-3.352000000b0ea4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11793622
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	939860	7.9692226866352	Illumina Single End PCR Primer 1 (100% over 51bp)
GTGACTGGAGTTAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCT	24062	0.20402553176623772	Illumina Single End PCR Primer 1 (100% over 39bp)
GTGACTGGAGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCG	22058	0.18703329647160133	Illumina Single End PCR Primer 1 (100% over 41bp)
AGATCGGAAGAGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCT	13476	0.11426515111303381	Illumina Single End PCR Primer 1 (100% over 39bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	116425	43.080887	45
GCACACG	25645	42.15638	18
GGTCGCC	119145	42.00086	44
CACACGT	19880	41.360527	19
TGGTCGC	120035	41.294937	43
GTGGTCG	119940	41.288166	42
AGCACAC	27255	40.911274	17
GGTGGTC	121565	40.72953	41
GAGCACA	29135	40.54006	16
CGGTGGT	122330	40.36991	40
AGAGCAC	29370	40.24562	15
ACACGTC	11745	40.130173	20
CACGTAG	8855	38.853992	21
GTGACTG	12635	38.30529	1
ACACGTA	9080	38.21315	20
CACACGA	6795	37.95347	19
ACGTCAG	8660	37.83171	22
ACACGAG	6785	37.782246	20
TGACTGG	12845	37.398586	2
CACGTCA	9070	36.147892	21