H5TH7BCX2_l02n02_gal-ssb_gal_doxrap-2.352000000b0e8a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H5TH7BCX2_l02n02_gal-ssb_gal_doxrap-2.352000000b0e8a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	55651
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	3956	7.108587446766455	Illumina Single End PCR Primer 1 (100% over 51bp)
GTGACTGGAGTTAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCT	85	0.1527375968086827	Illumina Single End PCR Primer 1 (100% over 39bp)
GTGACTGGAGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCG	72	0.1293777290614724	Illumina Single End PCR Primer 1 (100% over 41bp)
AGATCGGAAGAGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCT	65	0.11679933873605147	Illumina Single End PCR Primer 1 (100% over 39bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGATCAG	30	2.1409833E-6	44.96137	7
AGAGCAC	105	0.0	44.961365	15
GAGCACA	110	0.0	42.917667	16
AGCACAC	105	0.0	42.820347	17
GCACACG	105	0.0	42.820347	18
GTCGCCG	495	0.0	42.008743	45
GGTCGCC	505	0.0	41.176888	44
GTGGTCG	515	0.0	40.377335	42
TGGTCGC	525	0.0	40.038765	43
CAGATAG	45	1.8864739E-8	39.965656	6
ACACGTC	40	3.4026743E-7	39.341194	20
ACGTAGA	40	3.4026743E-7	39.341194	22
CACGTAG	40	3.4026743E-7	39.341194	21
GGTGGTC	535	0.0	39.113712	41
AAGAGCA	115	0.0	39.09684	14
CGGTGGT	540	0.0	38.75155	40
TCGCCGT	35	5.952492E-6	38.747192	45
CACACGT	90	0.0	37.467804	19
TCTCGGT	565	0.0	36.67161	37
CTCGGTG	565	0.0	36.638634	38